Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 MAPK6PS3-201ENST00000403865 2162 ntBASIC10.19□□□□□ -0.78
PSEN1P49768 MTCL1-207ENST00000518815 3963 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
PSEN1P49768 ZNF195-204ENST00000354599 2970 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
PSEN1P49768 AL356961.1-201ENST00000567967 1923 ntBASIC10.19□□□□□ -0.78
PSEN1P49768 NRXN3-202ENST00000335750 2764 ntTSL 5 BASIC10.19□□□□□ -0.78
PSEN1P49768 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PSEN1P49768 CACNB2-204ENST00000377315 3461 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PSEN1P49768 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
PSEN1P49768 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PSEN1P49768 AC025031.5-201ENST00000623851 2523 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 CES5A-208ENST00000541580 1669 ntTSL 5 BASIC10.18□□□□□ -0.78
PSEN1P49768 AC114689.1-201ENST00000578727 2484 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC10.18□□□□□ -0.78
PSEN1P49768 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PSEN1P49768 KCNE1-204ENST00000399289 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PSEN1P49768 AC108704.2-201ENST00000623017 1565 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
PSEN1P49768 GAREM1-201ENST00000269209 3006 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
PSEN1P49768 MAPK10-310ENST00000641384 2213 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC10.18□□□□□ -0.78
PSEN1P49768 TAF1L-201ENST00000242310 6216 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
PSEN1P49768 LARP1BP1-201ENST00000506036 1359 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 ABI1-201ENST00000346832 3289 ntTSL 2 BASIC10.18□□□□□ -0.78
PSEN1P49768 C2orf42-201ENST00000264434 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PSEN1P49768 APOL2-202ENST00000358502 2551 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
PSEN1P49768 POTEA-202ENST00000522175 1931 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PSEN1P49768 MYH10-201ENST00000269243 7662 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PSEN1P49768 MYH10-203ENST00000379980 7694 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PSEN1P49768 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
PSEN1P49768 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PSEN1P49768 Y_RNA.128-201ENST00000363391 112 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 Y_RNA.133-201ENST00000363428 110 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 Y_RNA.146-201ENST00000363549 102 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PSEN1P49768 VSTM1-203ENST00000376626 922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
PSEN1P49768 MIR559-201ENST00000385188 96 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 TRBV7-6-201ENST00000390374 392 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
PSEN1P49768 RPS7P15-201ENST00000415804 584 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 SNRPEP10-201ENST00000420249 274 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC10.18□□□□□ -0.78
PSEN1P49768 AL139246.3-201ENST00000424215 626 ntTSL 5 BASIC10.18□□□□□ -0.78
PSEN1P49768 OFD1P12Y-201ENST00000427963 1207 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
PSEN1P49768 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC10.18□□□□□ -0.78
PSEN1P49768 RPL29P7-201ENST00000440227 457 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 SNX18P9-201ENST00000440580 835 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC10.18□□□□□ -0.78
PSEN1P49768 AC093655.1-201ENST00000446187 641 ntTSL 5 BASIC10.18□□□□□ -0.78
PSEN1P49768 OR7A15P-201ENST00000449848 1009 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC10.18□□□□□ -0.78
PSEN1P49768 RPSAP18-201ENST00000453374 886 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 SCDP1-201ENST00000455244 1081 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 RN7SL384P-201ENST00000490382 298 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 AC107956.2-201ENST00000496042 454 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 PPM1K-204ENST00000508256 923 ntTSL 2 BASIC10.18□□□□□ -0.78
PSEN1P49768 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC10.18□□□□□ -0.78
PSEN1P49768 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC10.18□□□□□ -0.78
PSEN1P49768 LINC01411-206ENST00000515513 770 ntTSL 5 BASIC10.18□□□□□ -0.78
PSEN1P49768 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC10.18□□□□□ -0.78
PSEN1P49768 CA1-215ENST00000522389 551 ntTSL 3 BASIC10.18□□□□□ -0.78
PSEN1P49768 AC090099.3-201ENST00000524640 979 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 GS1-24F4.2-202ENST00000531701 380 ntTSL 3 BASIC10.18□□□□□ -0.78
PSEN1P49768 AC078950.1-204ENST00000540635 523 ntTSL 3 BASIC10.18□□□□□ -0.78
PSEN1P49768 ELOB-205ENST00000572954 331 ntTSL 2 BASIC10.18□□□□□ -0.78
PSEN1P49768 USP2-AS1-204ENST00000577297 689 ntTSL 3 BASIC10.18□□□□□ -0.78
PSEN1P49768 AL161725.1-212ENST00000585819 745 ntTSL 5 BASIC10.18□□□□□ -0.78
PSEN1P49768 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC10.18□□□□□ -0.78
PSEN1P49768 AC004466.3-201ENST00000615576 546 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 RHAG-203ENST00000618248 1203 ntTSL 5 BASIC10.18□□□□□ -0.78
PSEN1P49768 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
PSEN1P49768 MTFR1L-204ENST00000374307 1868 ntTSL 2 BASIC10.18□□□□□ -0.78
PSEN1P49768 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PSEN1P49768 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC10.18□□□□□ -0.78
PSEN1P49768 SLC3A1-210ENST00000611973 1737 ntTSL 5 BASIC10.18□□□□□ -0.78
PSEN1P49768 KANK1-210ENST00000619269 5688 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
PSEN1P49768 SH3YL1-205ENST00000403712 1695 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PSEN1P49768 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC10.18□□□□□ -0.78
PSEN1P49768 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC10.18□□□□□ -0.78
PSEN1P49768 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PSEN1P49768 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PSEN1P49768 ABCA11P-202ENST00000504019 2110 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 RPE-201ENST00000354506 3165 ntTSL 2 BASIC10.18□□□□□ -0.78
PSEN1P49768 ATP8A2P2-201ENST00000437678 1568 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 UGT2B24P-201ENST00000514441 1597 ntBASIC10.18□□□□□ -0.78
PSEN1P49768 AC027045.2-201ENST00000634974 1571 ntTSL 5 BASIC10.18□□□□□ -0.78
PSEN1P49768 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PSEN1P49768 POC5-211ENST00000510798 1524 ntTSL 2 BASIC10.17□□□□□ -0.78
PSEN1P49768 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
PSEN1P49768 LINC01550-202ENST00000502187 2455 ntTSL 2 BASIC10.17□□□□□ -0.78
PSEN1P49768 PNMA8A-202ENST00000438932 3335 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
PSEN1P49768 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
PSEN1P49768 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC10.17□□□□□ -0.78
PSEN1P49768 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PSEN1P49768 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PSEN1P49768 TTL-201ENST00000233336 14269 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PSEN1P49768 CLTCL1-202ENST00000427926 5513 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
PSEN1P49768 SLF2-201ENST00000238961 7288 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
PSEN1P49768 DISP2-201ENST00000267889 12614 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PSEN1P49768 ETFB-202ENST00000354232 3551 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
PSEN1P49768 AL356289.3-201ENST00000640049 2669 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms