Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
CPS1P31327 ADGRG6-201ENST00000230173 7026 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CPS1P31327 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CPS1P31327 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
CPS1P31327 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CPS1P31327 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CPS1P31327 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CPS1P31327 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CPS1P31327 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CPS1P31327 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC9.93□□□□□ -0.82
CPS1P31327 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC9.93□□□□□ -0.82
CPS1P31327 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC9.93□□□□□ -0.82
CPS1P31327 LARP1P1-201ENST00000407692 292 ntBASIC9.93□□□□□ -0.82
CPS1P31327 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC9.93□□□□□ -0.82
CPS1P31327 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC9.93□□□□□ -0.82
CPS1P31327 RN7SL552P-201ENST00000462094 276 ntBASIC9.93□□□□□ -0.82
CPS1P31327 RN7SL160P-201ENST00000468558 284 ntBASIC9.93□□□□□ -0.82
CPS1P31327 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CPS1P31327 LECT2-205ENST00000522943 574 ntTSL 3 BASIC9.93□□□□□ -0.82
CPS1P31327 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC9.93□□□□□ -0.82
CPS1P31327 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC9.93□□□□□ -0.82
CPS1P31327 MIR4502-201ENST00000580432 81 ntBASIC9.93□□□□□ -0.82
CPS1P31327 AC079776.5-201ENST00000641920 211 ntBASIC9.93□□□□□ -0.82
CPS1P31327 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
CPS1P31327 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
CPS1P31327 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CPS1P31327 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC9.93□□□□□ -0.82
CPS1P31327 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CPS1P31327 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC9.93□□□□□ -0.82
CPS1P31327 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC9.93□□□□□ -0.82
CPS1P31327 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CPS1P31327 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CPS1P31327 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CPS1P31327 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CPS1P31327 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
CPS1P31327 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC9.93□□□□□ -0.82
CPS1P31327 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC9.92□□□□□ -0.82
CPS1P31327 SNORA70G-201ENST00000383923 142 ntBASIC9.92□□□□□ -0.82
CPS1P31327 MIR188-201ENST00000385034 86 ntBASIC9.92□□□□□ -0.82
CPS1P31327 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC9.92□□□□□ -0.82
CPS1P31327 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC9.92□□□□□ -0.82
CPS1P31327 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC9.92□□□□□ -0.82
CPS1P31327 AC074386.1-201ENST00000476560 767 ntBASIC9.92□□□□□ -0.82
CPS1P31327 PGAM4P2-201ENST00000512491 721 ntBASIC9.92□□□□□ -0.82
CPS1P31327 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC9.92□□□□□ -0.82
CPS1P31327 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC9.92□□□□□ -0.82
CPS1P31327 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC9.92□□□□□ -0.82
CPS1P31327 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC9.92□□□□□ -0.82
CPS1P31327 AC068802.1-201ENST00000603420 732 ntBASIC9.92□□□□□ -0.82
CPS1P31327 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
CPS1P31327 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
CPS1P31327 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CPS1P31327 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC9.92□□□□□ -0.82
CPS1P31327 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CPS1P31327 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CPS1P31327 IPO7P2-201ENST00000451446 1750 ntBASIC9.92□□□□□ -0.82
CPS1P31327 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CPS1P31327 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
CPS1P31327 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CPS1P31327 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
CPS1P31327 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC9.92□□□□□ -0.82
CPS1P31327 THAP12P7-201ENST00000520248 2290 ntBASIC9.92□□□□□ -0.82
CPS1P31327 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC9.92□□□□□ -0.82
CPS1P31327 AL358913.2-201ENST00000553881 1548 ntBASIC9.92□□□□□ -0.82
CPS1P31327 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
CPS1P31327 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
CPS1P31327 AC245505.2-201ENST00000553572 3055 ntBASIC9.92□□□□□ -0.82
CPS1P31327 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CPS1P31327 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CPS1P31327 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
CPS1P31327 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CPS1P31327 GMFG-201ENST00000253054 616 ntTSL 5 BASIC9.92□□□□□ -0.82
CPS1P31327 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CPS1P31327 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC9.92□□□□□ -0.82
CPS1P31327 RPL5P34-201ENST00000426545 891 ntBASIC9.92□□□□□ -0.82
CPS1P31327 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC9.92□□□□□ -0.82
CPS1P31327 AC092106.2-201ENST00000436597 487 ntBASIC9.92□□□□□ -0.82
CPS1P31327 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CPS1P31327 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC9.92□□□□□ -0.82
CPS1P31327 RN7SL413P-201ENST00000482700 297 ntBASIC9.92□□□□□ -0.82
CPS1P31327 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC9.92□□□□□ -0.82
CPS1P31327 NANOGNBP2-201ENST00000544753 553 ntBASIC9.92□□□□□ -0.82
CPS1P31327 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC9.92□□□□□ -0.82
CPS1P31327 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC9.92□□□□□ -0.82
CPS1P31327 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC9.92□□□□□ -0.82
CPS1P31327 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC9.92□□□□□ -0.82
CPS1P31327 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC9.92□□□□□ -0.82
CPS1P31327 AC067773.1-201ENST00000603284 1094 ntBASIC9.92□□□□□ -0.82
CPS1P31327 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CPS1P31327 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CPS1P31327 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
CPS1P31327 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
CPS1P31327 ACP6-205ENST00000583509 6923 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CPS1P31327 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CPS1P31327 LINC01910-201ENST00000582251 2637 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
CPS1P31327 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
CPS1P31327 TCF20-202ENST00000359486 7410 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CPS1P31327 RARSP1-201ENST00000542842 1418 ntBASIC9.91□□□□□ -0.82
CPS1P31327 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CPS1P31327 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms