Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
ERCC3P19447 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC8.98□□□□□ -0.97
ERCC3P19447 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC8.98□□□□□ -0.97
ERCC3P19447 AC103833.1-201ENST00000517442 172 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC8.98□□□□□ -0.97
ERCC3P19447 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC8.98□□□□□ -0.97
ERCC3P19447 APEX1-214ENST00000557054 888 ntTSL 5 BASIC8.98□□□□□ -0.97
ERCC3P19447 AC090912.1-201ENST00000578831 570 ntTSL 4 BASIC8.98□□□□□ -0.97
ERCC3P19447 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC8.98□□□□□ -0.97
ERCC3P19447 AC090241.1-201ENST00000587732 621 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 EXOSC3P2-201ENST00000594464 497 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 AC027334.1-201ENST00000603257 310 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 HNRNPA1P67-201ENST00000604027 926 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 AL109936.2-201ENST00000605350 650 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 5S_rRNA.20-201ENST00000612104 118 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 AC004477.3-201ENST00000614061 590 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 BX005195.1-201ENST00000618097 1198 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 AC119674.1-209ENST00000642031 997 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC8.98□□□□□ -0.97
ERCC3P19447 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
ERCC3P19447 SLC16A1P1-201ENST00000486743 1510 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 ENO1P4-201ENST00000416471 1785 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
ERCC3P19447 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
ERCC3P19447 QRSL1P3-201ENST00000552666 1316 ntBASIC8.98□□□□□ -0.97
ERCC3P19447 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ERCC3P19447 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC8.98□□□□□ -0.97
ERCC3P19447 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
ERCC3P19447 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ERCC3P19447 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ERCC3P19447 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ERCC3P19447 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ERCC3P19447 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
ERCC3P19447 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ERCC3P19447 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ERCC3P19447 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
ERCC3P19447 EML5-201ENST00000380664 5910 ntTSL 5 BASIC8.97□□□□□ -0.97
ERCC3P19447 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC8.97□□□□□ -0.97
ERCC3P19447 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ERCC3P19447 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ERCC3P19447 OR7E11P-202ENST00000642027 1491 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
ERCC3P19447 AP002364.1-201ENST00000623330 3386 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ERCC3P19447 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ERCC3P19447 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
ERCC3P19447 AL157713.1-201ENST00000379752 1531 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 AC106754.1-201ENST00000562632 1513 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ERCC3P19447 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
ERCC3P19447 RPS3AP25-201ENST00000411660 793 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 SEPT7P8-201ENST00000413308 775 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 RPL7P13-201ENST00000415103 741 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 AC003071.2-201ENST00000423857 315 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC8.97□□□□□ -0.97
ERCC3P19447 AL596268.1-201ENST00000427910 1048 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC8.97□□□□□ -0.97
ERCC3P19447 BUD31P2-201ENST00000449374 300 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 TAAR3P-201ENST00000466706 1078 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 TAAR3P-202ENST00000481759 1025 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 OR10J9P-201ENST00000511932 987 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 RN7SKP242-201ENST00000515967 289 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC8.97□□□□□ -0.97
ERCC3P19447 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC8.97□□□□□ -0.97
ERCC3P19447 AC023080.1-201ENST00000551663 931 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC8.97□□□□□ -0.97
ERCC3P19447 AC012181.2-201ENST00000570210 699 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 RN7SL689P-201ENST00000577215 297 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
ERCC3P19447 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC8.97□□□□□ -0.97
ERCC3P19447 AL121652.1-201ENST00000608851 448 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 MIR1264-201ENST00000616374 69 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 FAM184A-213ENST00000617072 1251 ntTSL 2 BASIC8.97□□□□□ -0.97
ERCC3P19447 AL645927.2-201ENST00000618350 349 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
ERCC3P19447 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ERCC3P19447 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ERCC3P19447 AC018880.1-201ENST00000418898 1319 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ERCC3P19447 MAPK10-319ENST00000641459 2542 ntBASIC8.97□□□□□ -0.97
ERCC3P19447 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ERCC3P19447 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
ERCC3P19447 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC8.97□□□□□ -0.97
ERCC3P19447 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ERCC3P19447 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.97□□□□□ -0.97
ERCC3P19447 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ERCC3P19447 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ERCC3P19447 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
ERCC3P19447 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ERCC3P19447 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC8.97□□□□□ -0.97
ERCC3P19447 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC8.97□□□□□ -0.97
ERCC3P19447 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
ERCC3P19447 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
ERCC3P19447 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC8.96□□□□□ -0.97
ERCC3P19447 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC8.96□□□□□ -0.97
ERCC3P19447 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
ERCC3P19447 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
ERCC3P19447 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
ERCC3P19447 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.97
ERCC3P19447 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms