Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC026336.1-201ENST00000466577 351 ntBASIC8.48□□□□□ -1.05
HLA-DOAP06340 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC8.48□□□□□ -1.05
HLA-DOAP06340 PGAM4P2-201ENST00000512491 721 ntBASIC8.48□□□□□ -1.05
HLA-DOAP06340 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC8.48□□□□□ -1.05
HLA-DOAP06340 MRPS5P3-201ENST00000515577 166 ntBASIC8.48□□□□□ -1.05
HLA-DOAP06340 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC8.48□□□□□ -1.05
HLA-DOAP06340 RN7SL32P-201ENST00000580514 281 ntBASIC8.48□□□□□ -1.05
HLA-DOAP06340 RPS27AP19-201ENST00000597285 458 ntBASIC8.48□□□□□ -1.05
HLA-DOAP06340 AL139317.4-201ENST00000605879 760 ntBASIC8.48□□□□□ -1.05
HLA-DOAP06340 AC008626.2-201ENST00000624425 248 ntBASIC8.48□□□□□ -1.05
HLA-DOAP06340 AC073488.2-201ENST00000631903 751 ntBASIC8.48□□□□□ -1.05
HLA-DOAP06340 AC140479.4-205ENST00000636339 820 ntBASIC8.48□□□□□ -1.05
HLA-DOAP06340 AL356361.1-201ENST00000400943 1459 ntBASIC8.48□□□□□ -1.05
HLA-DOAP06340 AC010886.1-201ENST00000437380 2869 ntBASIC8.48□□□□□ -1.05
HLA-DOAP06340 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
HLA-DOAP06340 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
HLA-DOAP06340 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
HLA-DOAP06340 UBR4-201ENST00000375218 4031 ntTSL 2 BASIC8.48□□□□□ -1.05
HLA-DOAP06340 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.48□□□□□ -1.05
HLA-DOAP06340 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
HLA-DOAP06340 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-DOAP06340 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-DOAP06340 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-DOAP06340 AC004491.1-201ENST00000623029 1882 ntBASIC8.47□□□□□ -1.05
HLA-DOAP06340 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-DOAP06340 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-DOAP06340 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC8.47□□□□□ -1.05
HLA-DOAP06340 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.47□□□□□ -1.05
HLA-DOAP06340 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-DOAP06340 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC8.47□□□□□ -1.05
HLA-DOAP06340 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC8.47□□□□□ -1.05
HLA-DOAP06340 AC096922.1-201ENST00000461635 651 ntBASIC8.47□□□□□ -1.05
HLA-DOAP06340 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC8.47□□□□□ -1.05
HLA-DOAP06340 RPL23AP80-201ENST00000495605 424 ntBASIC8.47□□□□□ -1.05
HLA-DOAP06340 AC113191.1-201ENST00000517759 403 ntBASIC8.47□□□□□ -1.05
HLA-DOAP06340 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC8.47□□□□□ -1.05
HLA-DOAP06340 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
HLA-DOAP06340 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC8.47□□□□□ -1.05
HLA-DOAP06340 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC8.47□□□□□ -1.05
HLA-DOAP06340 IGLJCOR18-201ENST00000584002 424 ntBASIC8.47□□□□□ -1.05
HLA-DOAP06340 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC8.47□□□□□ -1.05
HLA-DOAP06340 AC023513.1-201ENST00000604396 691 ntBASIC8.47□□□□□ -1.05
HLA-DOAP06340 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC8.47□□□□□ -1.05
HLA-DOAP06340 AC135068.11-201ENST00000636378 921 ntBASIC8.47□□□□□ -1.05
HLA-DOAP06340 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-DOAP06340 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC8.47□□□□□ -1.05
HLA-DOAP06340 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-DOAP06340 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-DOAP06340 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-DOAP06340 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.47□□□□□ -1.05
HLA-DOAP06340 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-DOAP06340 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.47□□□□□ -1.05
HLA-DOAP06340 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC8.47□□□□□ -1.05
HLA-DOAP06340 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC8.47□□□□□ -1.05
HLA-DOAP06340 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HLA-DOAP06340 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
HLA-DOAP06340 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
HLA-DOAP06340 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC8.46□□□□□ -1.05
HLA-DOAP06340 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC8.46□□□□□ -1.05
HLA-DOAP06340 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
HLA-DOAP06340 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
HLA-DOAP06340 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-DOAP06340 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-DOAP06340 MIR99A-201ENST00000384906 81 ntBASIC8.46□□□□□ -1.06
HLA-DOAP06340 AL136100.1-201ENST00000407696 330 ntBASIC8.46□□□□□ -1.06
HLA-DOAP06340 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 RPL5P6-201ENST00000425640 886 ntBASIC8.46□□□□□ -1.06
HLA-DOAP06340 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 PA2G4P1-201ENST00000442248 1197 ntBASIC8.46□□□□□ -1.06
HLA-DOAP06340 AL845321.1-201ENST00000444603 348 ntBASIC8.46□□□□□ -1.06
HLA-DOAP06340 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-DOAP06340 PPIAP32-201ENST00000449940 472 ntBASIC8.46□□□□□ -1.06
HLA-DOAP06340 AL583856.1-201ENST00000454078 1101 ntBASIC8.46□□□□□ -1.06
HLA-DOAP06340 AC114982.2-201ENST00000461396 358 ntBASIC8.46□□□□□ -1.06
HLA-DOAP06340 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 AC131935.1-201ENST00000524621 333 ntBASIC8.46□□□□□ -1.06
HLA-DOAP06340 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 AP002004.1-206ENST00000532441 876 ntBASIC8.46□□□□□ -1.06
HLA-DOAP06340 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 AC068408.1-201ENST00000577406 1144 ntBASIC8.46□□□□□ -1.06
HLA-DOAP06340 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 AL355333.1-201ENST00000605632 279 ntBASIC8.46□□□□□ -1.06
HLA-DOAP06340 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-DOAP06340 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-DOAP06340 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-DOAP06340 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
HLA-DOAP06340 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-DOAP06340 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
HLA-DOAP06340 AL390195.2-201ENST00000564771 2023 ntBASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms