Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL596275.2-207ENST00000641188 675 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 GID8-201ENST00000266069 4397 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 AL133268.1-201ENST00000405676 1401 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 RNF2-202ENST00000367510 3606 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 ATP5A1-202ENST00000398752 5818 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 KCNMA1-228ENST00000638223 4340 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 NRXN3-215ENST00000557594 3381 ntTSL 2 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 MAGEB16-202ENST00000399987 1736 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 C8orf46-201ENST00000305454 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 ZEB2-229ENST00000629520 2564 ntTSL 2 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 FTSJ3-201ENST00000427159 3559 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 FBXW11P1-201ENST00000393804 1474 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 LINC01304-204ENST00000454455 2454 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC020604.1-201ENST00000622979 1909 ntBASIC9.52□□□□□ -0.88
LRCH3Q96II8 BBS9-204ENST00000396127 3914 ntTSL 5 BASIC9.52□□□□□ -0.88
LRCH3Q96II8 ZRANB2-202ENST00000370920 3078 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.88
LRCH3Q96II8 NLRC4-201ENST00000342905 1362 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
LRCH3Q96II8 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 SZRD1-210ENST00000492354 3401 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 LIAS-222ENST00000640888 4041 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 OR2T1-202ENST00000642005 2104 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 LINC01007-201ENST00000434537 2291 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 ZNF432-201ENST00000221315 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 ZNF726-201ENST00000322487 2330 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 TREM1-202ENST00000334475 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 SNORA68B-201ENST00000364518 133 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 DDR2-201ENST00000367921 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 MIR181A1-201ENST00000385026 110 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 CCR6-203ENST00000400926 3216 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 AL079341.1-201ENST00000404701 1207 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 MEAF6P1-201ENST00000416092 327 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 CFL1P7-201ENST00000424759 486 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 ISX-AS1-201ENST00000427881 202 ntTSL 3 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 MED14P1-201ENST00000430517 648 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 OR6R1P-201ENST00000431838 940 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 DNAJC19P4-201ENST00000440115 345 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 TRAPPC2P8-201ENST00000440676 396 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 AL353803.3-201ENST00000444641 335 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 CYP4F25P-201ENST00000446871 520 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 MARK2P14-201ENST00000449657 628 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 RN7SL272P-201ENST00000487762 289 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 AC097263.1-201ENST00000496795 606 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 NMNAT1P4-201ENST00000505598 840 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 SEPT10P1-201ENST00000517342 1162 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 IGHV3-33-2-201ENST00000517703 346 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 HIGD1AP18-201ENST00000520730 278 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 OR5G1P-201ENST00000525221 946 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 AC022690.1-201ENST00000526681 550 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 GLYATL1P3-201ENST00000527482 909 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 AC069235.1-202ENST00000545535 540 ntTSL 3 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 AL359792.1-201ENST00000554046 385 ntTSL 3 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 CFL2-206ENST00000556161 546 ntTSL 4 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 ZNF615-206ENST00000597747 704 ntTSL 5 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 AC243960.5-201ENST00000597858 255 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 EIF1P6-201ENST00000600054 334 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 AC022400.4-201ENST00000604613 286 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 AC011373.1-201ENST00000607270 237 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 AC096720.2-201ENST00000623308 2458 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 MIR3688-2-201ENST00000636963 87 ntBASIC9.52□□□□□ -0.89
LRCH3Q96II8 SPIN3-205ENST00000638289 4614 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 ATP2B2-203ENST00000383800 8900 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 MIGA1-201ENST00000370791 5288 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 AC090197.1-202ENST00000519692 4374 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 TNIK-203ENST00000357327 3996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 EYA4-208ENST00000452339 2411 ntTSL 2 BASIC9.52□□□□□ -0.89
LRCH3Q96II8 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 SRGAP2B-204ENST00000612199 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
LRCH3Q96II8 CFL1P1-203ENST00000438248 2120 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms