Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.61□□□□□ -1.19
LMO3Q8TAP4 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LMO3Q8TAP4 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LMO3Q8TAP4 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LMO3Q8TAP4 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LMO3Q8TAP4 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.61□□□□□ -1.19
LMO3Q8TAP4 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.61□□□□□ -1.19
LMO3Q8TAP4 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
LMO3Q8TAP4 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LMO3Q8TAP4 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LMO3Q8TAP4 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LMO3Q8TAP4 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LMO3Q8TAP4 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 RNA5SP172-201ENST00000365061 118 ntBASIC7.6□□□□□ -1.19
LMO3Q8TAP4 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 RPL9P21-201ENST00000392269 505 ntBASIC7.6□□□□□ -1.19
LMO3Q8TAP4 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7.6□□□□□ -1.19
LMO3Q8TAP4 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 PRKAR1AP1-201ENST00000441422 1162 ntBASIC7.6□□□□□ -1.19
LMO3Q8TAP4 PSMA6P2-201ENST00000457574 686 ntBASIC7.6□□□□□ -1.19
LMO3Q8TAP4 WBP1LP1-201ENST00000460451 896 ntBASIC7.6□□□□□ -1.19
LMO3Q8TAP4 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 AL031846.1-201ENST00000560933 314 ntBASIC7.6□□□□□ -1.19
LMO3Q8TAP4 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 ACTG1P15-201ENST00000570019 1063 ntBASIC7.6□□□□□ -1.19
LMO3Q8TAP4 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 AL034417.4-202ENST00000642135 2236 ntBASIC7.6□□□□□ -1.19
LMO3Q8TAP4 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
LMO3Q8TAP4 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 U3.48-201ENST00000363172 216 ntBASIC7.59□□□□□ -1.19
LMO3Q8TAP4 SNORA70.5-201ENST00000365519 135 ntBASIC7.59□□□□□ -1.19
LMO3Q8TAP4 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 SLC25A5P7-201ENST00000406156 896 ntBASIC7.59□□□□□ -1.19
LMO3Q8TAP4 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 AC134879.1-201ENST00000426062 394 ntBASIC7.59□□□□□ -1.19
LMO3Q8TAP4 CR391992.1-201ENST00000438601 394 ntBASIC7.59□□□□□ -1.19
LMO3Q8TAP4 RPL29P7-201ENST00000440227 457 ntBASIC7.59□□□□□ -1.19
LMO3Q8TAP4 BX005266.3-201ENST00000443013 1075 ntBASIC7.59□□□□□ -1.19
LMO3Q8TAP4 SDHCP3-201ENST00000445371 506 ntBASIC7.59□□□□□ -1.19
LMO3Q8TAP4 AC092421.1-201ENST00000448148 418 ntBASIC7.59□□□□□ -1.19
LMO3Q8TAP4 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC7.59□□□□□ -1.19
LMO3Q8TAP4 GAPDHP53-201ENST00000458397 924 ntBASIC7.59□□□□□ -1.19
LMO3Q8TAP4 RN7SL834P-201ENST00000461450 286 ntBASIC7.59□□□□□ -1.19
LMO3Q8TAP4 RPL5P15-201ENST00000475870 897 ntBASIC7.59□□□□□ -1.19
LMO3Q8TAP4 RNA5SP518-201ENST00000515957 119 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms