Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 RN7SL267P-201ENST00000485107 261 ntBASIC8.59□□□□□ -1.03
PDS5AQ29RF7 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 AC027796.1-201ENST00000575593 512 ntBASIC8.59□□□□□ -1.03
PDS5AQ29RF7 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC8.59□□□□□ -1.03
PDS5AQ29RF7 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.59□□□□□ -1.04
PDS5AQ29RF7 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
PDS5AQ29RF7 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC8.59□□□□□ -1.04
PDS5AQ29RF7 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC8.59□□□□□ -1.04
PDS5AQ29RF7 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
PDS5AQ29RF7 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 CREM-216ENST00000429130 1476 ntTSL 5 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 RN7SKP91-201ENST00000410852 288 ntBASIC8.58□□□□□ -1.04
PDS5AQ29RF7 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 SNX19-202ENST00000426933 888 ntTSL 2 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.58□□□□□ -1.04
PDS5AQ29RF7 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 AC009518.3-201ENST00000438972 253 ntBASIC8.58□□□□□ -1.04
PDS5AQ29RF7 RPL23AP8-201ENST00000479812 475 ntBASIC8.58□□□□□ -1.04
PDS5AQ29RF7 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 OR4A1P-201ENST00000532342 920 ntBASIC8.58□□□□□ -1.04
PDS5AQ29RF7 AC069240.2-201ENST00000550242 609 ntBASIC8.58□□□□□ -1.04
PDS5AQ29RF7 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 AC073263.3-201ENST00000624449 858 ntBASIC8.58□□□□□ -1.04
PDS5AQ29RF7 AC127071.1-201ENST00000624997 712 ntBASIC8.58□□□□□ -1.04
PDS5AQ29RF7 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 AC102941.1-201ENST00000567616 1537 ntBASIC8.58□□□□□ -1.04
PDS5AQ29RF7 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 CASC19-205ENST00000641013 1411 ntBASIC8.58□□□□□ -1.04
PDS5AQ29RF7 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDS5AQ29RF7 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
PDS5AQ29RF7 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.57□□□□□ -1.04
PDS5AQ29RF7 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC8.57□□□□□ -1.04
PDS5AQ29RF7 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC8.57□□□□□ -1.04
PDS5AQ29RF7 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PDS5AQ29RF7 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC8.57□□□□□ -1.04
PDS5AQ29RF7 RN7SKP148-201ENST00000410179 275 ntBASIC8.57□□□□□ -1.04
PDS5AQ29RF7 VN1R66P-201ENST00000412929 916 ntBASIC8.57□□□□□ -1.04
PDS5AQ29RF7 RPL18AP14-201ENST00000417685 526 ntBASIC8.57□□□□□ -1.04
PDS5AQ29RF7 RPL17P17-201ENST00000419491 557 ntBASIC8.57□□□□□ -1.04
PDS5AQ29RF7 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC8.57□□□□□ -1.04
PDS5AQ29RF7 AGKP1-201ENST00000455254 1263 ntBASIC8.57□□□□□ -1.04
PDS5AQ29RF7 RN7SL372P-201ENST00000461982 298 ntBASIC8.57□□□□□ -1.04
PDS5AQ29RF7 AC063955.1-201ENST00000462872 685 ntBASIC8.57□□□□□ -1.04
PDS5AQ29RF7 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC8.57□□□□□ -1.04
PDS5AQ29RF7 AC106782.7-201ENST00000624024 418 ntBASIC8.57□□□□□ -1.04
PDS5AQ29RF7 AC133555.5-201ENST00000624430 418 ntBASIC8.57□□□□□ -1.04
PDS5AQ29RF7 AC093616.1-201ENST00000427434 2095 ntBASIC8.57□□□□□ -1.04
PDS5AQ29RF7 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PDS5AQ29RF7 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PDS5AQ29RF7 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms