Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.53□□□□□ -1.2
RFPL1O75677 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.53□□□□□ -1.2
RFPL1O75677 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.53□□□□□ -1.2
RFPL1O75677 CTAGE11P-201ENST00000451540 2353 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.53□□□□□ -1.2
RFPL1O75677 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.53□□□□□ -1.2
RFPL1O75677 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
RFPL1O75677 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 RNA5SP378-201ENST00000363646 120 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RFPL1O75677 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 MIR575-201ENST00000385013 94 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 RPL5P35-201ENST00000398869 816 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 U3.31-201ENST00000408113 216 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 GLS-203ENST00000409215 632 ntTSL 4 BASIC7.53□□□□□ -1.2
RFPL1O75677 BCRP8-201ENST00000412037 255 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 AL358942.1-201ENST00000418595 1178 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
RFPL1O75677 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC7.53□□□□□ -1.2
RFPL1O75677 SEPT14P12-201ENST00000442280 560 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 AL137074.1-201ENST00000442640 465 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 TDGF1P6-201ENST00000463873 448 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 RN7SL180P-201ENST00000466769 294 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC7.53□□□□□ -1.2
RFPL1O75677 AC087385.2-201ENST00000477729 498 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 AC016687.1-201ENST00000482574 353 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 RN7SL647P-201ENST00000485429 300 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 PANCR-201ENST00000503456 493 ntTSL 5 BASIC7.53□□□□□ -1.2
RFPL1O75677 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC7.53□□□□□ -1.2
RFPL1O75677 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC7.53□□□□□ -1.2
RFPL1O75677 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.53□□□□□ -1.2
RFPL1O75677 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.53□□□□□ -1.2
RFPL1O75677 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.53□□□□□ -1.2
RFPL1O75677 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC7.53□□□□□ -1.2
RFPL1O75677 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC7.53□□□□□ -1.2
RFPL1O75677 MIR4642-201ENST00000583943 82 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC7.53□□□□□ -1.2
RFPL1O75677 AL137190.1-201ENST00000603288 282 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 AC084036.1-201ENST00000609190 508 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 RAB28P4-201ENST00000622233 665 ntBASIC7.53□□□□□ -1.2
RFPL1O75677 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC7.53□□□□□ -1.2
RFPL1O75677 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.53□□□□□ -1.2
RFPL1O75677 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.53□□□□□ -1.2
RFPL1O75677 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
RFPL1O75677 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RFPL1O75677 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
RFPL1O75677 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.2
RFPL1O75677 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.52□□□□□ -1.2
RFPL1O75677 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
RFPL1O75677 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
RFPL1O75677 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
RFPL1O75677 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC7.52□□□□□ -1.21
RFPL1O75677 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RFPL1O75677 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RFPL1O75677 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RFPL1O75677 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RFPL1O75677 EML5-201ENST00000380664 5910 ntTSL 5 BASIC7.52□□□□□ -1.21
RFPL1O75677 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
RFPL1O75677 AC069222.1-201ENST00000608028 3360 ntBASIC7.52□□□□□ -1.21
RFPL1O75677 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RFPL1O75677 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
RFPL1O75677 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RFPL1O75677 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RFPL1O75677 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RFPL1O75677 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RFPL1O75677 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RFPL1O75677 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RFPL1O75677 SNORA30B-201ENST00000365319 129 ntBASIC7.52□□□□□ -1.21
RFPL1O75677 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
RFPL1O75677 PPCS-204ENST00000372562 966 ntTSL 2 BASIC7.52□□□□□ -1.21
RFPL1O75677 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RFPL1O75677 MIR181C-201ENST00000384881 110 ntBASIC7.52□□□□□ -1.21
RFPL1O75677 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RFPL1O75677 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.52□□□□□ -1.21
RFPL1O75677 PKMP3-201ENST00000405497 715 ntBASIC7.52□□□□□ -1.21
RFPL1O75677 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.52□□□□□ -1.21
RFPL1O75677 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC7.52□□□□□ -1.21
RFPL1O75677 ARAFP1-201ENST00000422172 605 ntBASIC7.52□□□□□ -1.21
RFPL1O75677 RCC2P2-201ENST00000422174 918 ntBASIC7.52□□□□□ -1.21
RFPL1O75677 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC7.52□□□□□ -1.21
RFPL1O75677 CR391992.1-201ENST00000438601 394 ntBASIC7.52□□□□□ -1.21
RFPL1O75677 MTCO3P43-201ENST00000440974 771 ntBASIC7.52□□□□□ -1.21
RFPL1O75677 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC7.52□□□□□ -1.21
RFPL1O75677 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.52□□□□□ -1.21
RFPL1O75677 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms