Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 XRCC6P5-201ENST00000435236 1795 ntBASIC8.64□□□□□ -1.03
SNED1Q8TER0 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC8.64□□□□□ -1.03
SNED1Q8TER0 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 RNU1-65P-201ENST00000363919 148 ntBASIC8.64□□□□□ -1.03
SNED1Q8TER0 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
SNED1Q8TER0 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC8.64□□□□□ -1.03
SNED1Q8TER0 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC8.64□□□□□ -1.03
SNED1Q8TER0 RNA5SP198-201ENST00000410376 127 ntBASIC8.64□□□□□ -1.03
SNED1Q8TER0 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC8.64□□□□□ -1.03
SNED1Q8TER0 RBMY2HP-201ENST00000457961 720 ntBASIC8.64□□□□□ -1.03
SNED1Q8TER0 RPL12P7-201ENST00000493832 494 ntBASIC8.64□□□□□ -1.03
SNED1Q8TER0 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC8.64□□□□□ -1.03
SNED1Q8TER0 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC8.64□□□□□ -1.03
SNED1Q8TER0 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC8.64□□□□□ -1.03
SNED1Q8TER0 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 AC025283.1-201ENST00000572039 734 ntBASIC8.64□□□□□ -1.03
SNED1Q8TER0 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC8.64□□□□□ -1.03
SNED1Q8TER0 AC089999.3-201ENST00000622440 577 ntBASIC8.64□□□□□ -1.03
SNED1Q8TER0 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
SNED1Q8TER0 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC8.64□□□□□ -1.03
SNED1Q8TER0 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
SNED1Q8TER0 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 AC025040.2-201ENST00000558657 1852 ntBASIC8.64□□□□□ -1.03
SNED1Q8TER0 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
SNED1Q8TER0 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC8.64□□□□□ -1.03
SNED1Q8TER0 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.64□□□□□ -1.03
SNED1Q8TER0 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC8.64□□□□□ -1.03
SNED1Q8TER0 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNED1Q8TER0 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 LARP1P1-201ENST00000407692 292 ntBASIC8.63□□□□□ -1.03
SNED1Q8TER0 RN7SKP86-201ENST00000410454 332 ntBASIC8.63□□□□□ -1.03
SNED1Q8TER0 AC018804.1-201ENST00000430381 618 ntBASIC8.63□□□□□ -1.03
SNED1Q8TER0 MYL6P3-201ENST00000436904 432 ntBASIC8.63□□□□□ -1.03
SNED1Q8TER0 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 SCARNA6-201ENST00000515982 265 ntBASIC8.63□□□□□ -1.03
SNED1Q8TER0 RNA5SP287-201ENST00000516358 103 ntBASIC8.63□□□□□ -1.03
SNED1Q8TER0 RGS5-220ENST00000528689 566 ntTSL 5 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 EEF1A1P17-201ENST00000547505 1275 ntBASIC8.63□□□□□ -1.03
SNED1Q8TER0 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 AL358913.2-201ENST00000553881 1548 ntBASIC8.63□□□□□ -1.03
SNED1Q8TER0 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 RNA5SP232-201ENST00000364144 119 ntBASIC8.63□□□□□ -1.03
SNED1Q8TER0 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SNED1Q8TER0 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 NAP1L4P2-201ENST00000425958 899 ntBASIC8.63□□□□□ -1.03
SNED1Q8TER0 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC8.63□□□□□ -1.03
SNED1Q8TER0 AP000805.1-201ENST00000471604 784 ntBASIC8.63□□□□□ -1.03
SNED1Q8TER0 RN7SL88P-201ENST00000480166 299 ntBASIC8.63□□□□□ -1.03
SNED1Q8TER0 SETP17-201ENST00000534163 817 ntBASIC8.63□□□□□ -1.03
SNED1Q8TER0 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms