Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 MBP-206ENST00000397863 4800 ntTSL 3 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 HSPD1P10-201ENST00000404829 1676 ntBASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
SHKBP1Q8TBC3 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 ZNF29P-201ENST00000225587 168 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 SNORD46-201ENST00000364043 104 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 RPL7-203ENST00000396466 762 ntTSL 3 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AL353151.1-201ENST00000402406 604 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AL121978.1-201ENST00000402778 359 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 BECN1P2-201ENST00000407947 812 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 MIR1302-8-201ENST00000408342 128 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 RNA5SP231-201ENST00000410496 138 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 MTCO3P4-201ENST00000419236 787 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 GAPDHP32-201ENST00000433816 998 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AL031667.1-201ENST00000440222 725 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 MTND2P4-201ENST00000445034 1004 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AC092421.1-201ENST00000448148 418 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AC104982.1-201ENST00000478775 574 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AC108475.1-201ENST00000507880 950 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AP003385.2-201ENST00000524910 973 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AC005771.1-201ENST00000585581 349 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AC021171.1-201ENST00000603137 706 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AC067959.1-201ENST00000604334 379 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AC021755.4-201ENST00000616620 456 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AL445493.3-201ENST00000619568 477 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AC104985.3-201ENST00000623479 597 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 HBG1-202ENST00000632727 369 ntTSL 3 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 AC074198.1-201ENST00000506546 1397 ntBASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC8.22□□□□□ -1.09
SHKBP1Q8TBC3 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SHKBP1Q8TBC3 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SHKBP1Q8TBC3 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SHKBP1Q8TBC3 AL356473.1-201ENST00000406203 1408 ntBASIC8.21□□□□□ -1.09
SHKBP1Q8TBC3 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC8.21□□□□□ -1.09
SHKBP1Q8TBC3 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.21□□□□□ -1.09
SHKBP1Q8TBC3 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SHKBP1Q8TBC3 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
SHKBP1Q8TBC3 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SHKBP1Q8TBC3 CREM-208ENST00000361599 2170 ntTSL 5 BASIC8.21□□□□□ -1.09
SHKBP1Q8TBC3 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SHKBP1Q8TBC3 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC8.21□□□□□ -1.09
SHKBP1Q8TBC3 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC8.21□□□□□ -1.09
SHKBP1Q8TBC3 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SHKBP1Q8TBC3 AP001527.1-201ENST00000566440 1957 ntBASIC8.21□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms