Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
ERCC2P18074 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC2P18074 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC2P18074 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC2P18074 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC2P18074 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC7.44□□□□□ -1.22
ERCC2P18074 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
ERCC2P18074 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC2P18074 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC7.44□□□□□ -1.22
ERCC2P18074 RNU6-1055P-201ENST00000391085 107 ntBASIC7.44□□□□□ -1.22
ERCC2P18074 CLCN3P1-201ENST00000423965 1017 ntBASIC7.44□□□□□ -1.22
ERCC2P18074 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC2P18074 NDUFB4P1-201ENST00000462398 381 ntBASIC7.44□□□□□ -1.22
ERCC2P18074 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.44□□□□□ -1.22
ERCC2P18074 AC055733.3-201ENST00000505214 523 ntBASIC7.44□□□□□ -1.22
ERCC2P18074 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC7.44□□□□□ -1.22
ERCC2P18074 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.44□□□□□ -1.22
ERCC2P18074 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.44□□□□□ -1.22
ERCC2P18074 ATP5J2P4-201ENST00000538774 267 ntBASIC7.44□□□□□ -1.22
ERCC2P18074 AC233290.1-201ENST00000553021 1186 ntBASIC7.44□□□□□ -1.22
ERCC2P18074 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.44□□□□□ -1.22
ERCC2P18074 RPSAP66-201ENST00000592196 606 ntBASIC7.44□□□□□ -1.22
ERCC2P18074 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC7.44□□□□□ -1.22
ERCC2P18074 AL589765.5-201ENST00000596133 515 ntBASIC7.44□□□□□ -1.22
ERCC2P18074 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.44□□□□□ -1.22
ERCC2P18074 AP005329.3-201ENST00000609924 686 ntBASIC7.44□□□□□ -1.22
ERCC2P18074 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
ERCC2P18074 AC211433.3-201ENST00000623770 375 ntBASIC7.44□□□□□ -1.22
ERCC2P18074 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC2P18074 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.44□□□□□ -1.22
ERCC2P18074 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
ERCC2P18074 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
ERCC2P18074 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC2P18074 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.44□□□□□ -1.22
ERCC2P18074 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
ERCC2P18074 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ERCC2P18074 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.44□□□□□ -1.22
ERCC2P18074 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.44□□□□□ -1.22
ERCC2P18074 AC005614.1-201ENST00000598952 3653 ntBASIC7.43□□□□□ -1.22
ERCC2P18074 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.43□□□□□ -1.22
ERCC2P18074 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC2P18074 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC2P18074 MELK-208ENST00000536987 2125 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC2P18074 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.43□□□□□ -1.22
ERCC2P18074 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC2P18074 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC2P18074 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC2P18074 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC2P18074 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC2P18074 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC2P18074 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC2P18074 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.43□□□□□ -1.22
ERCC2P18074 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC2P18074 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC2P18074 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC2P18074 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC7.43□□□□□ -1.22
ERCC2P18074 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
ERCC2P18074 AC090114.1-201ENST00000393266 448 ntBASIC7.43□□□□□ -1.22
ERCC2P18074 RBBP4P4-201ENST00000398588 1289 ntBASIC7.43□□□□□ -1.22
ERCC2P18074 TYMSP1-201ENST00000407851 869 ntBASIC7.43□□□□□ -1.22
ERCC2P18074 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC2P18074 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC2P18074 AC244452.1-201ENST00000413798 141 ntBASIC7.43□□□□□ -1.22
ERCC2P18074 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC2P18074 AC073900.1-201ENST00000429766 776 ntBASIC7.43□□□□□ -1.22
ERCC2P18074 NIP7P1-201ENST00000433227 512 ntBASIC7.43□□□□□ -1.22
ERCC2P18074 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC2P18074 CYCSP44-201ENST00000448560 313 ntBASIC7.43□□□□□ -1.22
ERCC2P18074 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC2P18074 PSPC1P2-201ENST00000455130 225 ntBASIC7.43□□□□□ -1.22
ERCC2P18074 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC2P18074 RN7SL775P-201ENST00000498361 336 ntBASIC7.43□□□□□ -1.22
ERCC2P18074 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.43□□□□□ -1.22
ERCC2P18074 AC024451.1-201ENST00000508013 779 ntBASIC7.43□□□□□ -1.22
ERCC2P18074 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC2P18074 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC7.43□□□□□ -1.22
ERCC2P18074 NDUFA3P4-201ENST00000560814 250 ntBASIC7.43□□□□□ -1.22
ERCC2P18074 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC7.43□□□□□ -1.22
ERCC2P18074 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.43□□□□□ -1.22
ERCC2P18074 RN7SL667P-201ENST00000582817 298 ntBASIC7.43□□□□□ -1.22
ERCC2P18074 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC2P18074 AC113361.1-201ENST00000606683 543 ntBASIC7.43□□□□□ -1.22
ERCC2P18074 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC2P18074 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.43□□□□□ -1.22
ERCC2P18074 AC078909.2-201ENST00000620584 398 ntBASIC7.43□□□□□ -1.22
ERCC2P18074 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC2P18074 AC116631.1-202ENST00000640984 683 ntBASIC7.43□□□□□ -1.22
ERCC2P18074 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC2P18074 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC2P18074 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC2P18074 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC2P18074 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC2P18074 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC2P18074 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC2P18074 ZNF969P-201ENST00000510345 2341 ntBASIC7.43□□□□□ -1.22
ERCC2P18074 AL358913.2-201ENST00000553881 1548 ntBASIC7.42□□□□□ -1.22
ERCC2P18074 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ERCC2P18074 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
ERCC2P18074 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
ERCC2P18074 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms