Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
FREM3P0C091 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC6.54□□□□□ -1.36
FREM3P0C091 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
FREM3P0C091 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC6.54□□□□□ -1.36
FREM3P0C091 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
FREM3P0C091 RNA5SP472-201ENST00000363868 119 ntBASIC6.54□□□□□ -1.36
FREM3P0C091 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
FREM3P0C091 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.54□□□□□ -1.36
FREM3P0C091 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.54□□□□□ -1.36
FREM3P0C091 AL136981.1-203ENST00000451452 3844 ntBASIC6.54□□□□□ -1.36
FREM3P0C091 PSMA6P2-201ENST00000457574 686 ntBASIC6.54□□□□□ -1.36
FREM3P0C091 RN7SL160P-201ENST00000468558 284 ntBASIC6.54□□□□□ -1.36
FREM3P0C091 AC079594.1-201ENST00000489757 331 ntBASIC6.54□□□□□ -1.36
FREM3P0C091 HSPE1P10-201ENST00000508631 558 ntBASIC6.54□□□□□ -1.36
FREM3P0C091 AC111000.1-201ENST00000514545 713 ntBASIC6.54□□□□□ -1.36
FREM3P0C091 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.54□□□□□ -1.36
FREM3P0C091 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.54□□□□□ -1.36
FREM3P0C091 EEF1B2P1-201ENST00000567221 672 ntBASIC6.54□□□□□ -1.36
FREM3P0C091 AC097376.1-201ENST00000602907 997 ntBASIC6.54□□□□□ -1.36
FREM3P0C091 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.54□□□□□ -1.36
FREM3P0C091 AC243725.1-201ENST00000637164 436 ntBASIC6.54□□□□□ -1.36
FREM3P0C091 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
FREM3P0C091 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
FREM3P0C091 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
FREM3P0C091 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.54□□□□□ -1.36
FREM3P0C091 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
FREM3P0C091 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.54□□□□□ -1.36
FREM3P0C091 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
FREM3P0C091 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC6.54□□□□□ -1.36
FREM3P0C091 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.54□□□□□ -1.36
FREM3P0C091 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
FREM3P0C091 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
FREM3P0C091 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
FREM3P0C091 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
FREM3P0C091 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.54□□□□□ -1.36
FREM3P0C091 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
FREM3P0C091 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.53□□□□□ -1.36
FREM3P0C091 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC6.53□□□□□ -1.36
FREM3P0C091 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
FREM3P0C091 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
FREM3P0C091 MFSD8-256ENST00000641949 1640 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
FREM3P0C091 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
FREM3P0C091 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC6.53□□□□□ -1.36
FREM3P0C091 U3.48-201ENST00000363172 216 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 RNU4-81P-201ENST00000363561 144 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 RPL12P1-201ENST00000374520 498 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.53□□□□□ -1.36
FREM3P0C091 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.53□□□□□ -1.36
FREM3P0C091 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.53□□□□□ -1.36
FREM3P0C091 AL022324.2-201ENST00000434827 780 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 EAF2-202ENST00000451944 960 ntTSL 2 BASIC6.53□□□□□ -1.36
FREM3P0C091 RN7SL569P-201ENST00000494652 288 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 AC073648.3-201ENST00000504939 925 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 IGKV2-29-201ENST00000521304 372 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC6.53□□□□□ -1.36
FREM3P0C091 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.53□□□□□ -1.36
FREM3P0C091 AC090971.3-201ENST00000557871 1041 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 OR4N3P-201ENST00000559395 818 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.53□□□□□ -1.36
FREM3P0C091 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.53□□□□□ -1.36
FREM3P0C091 AC092960.1-201ENST00000604762 351 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
FREM3P0C091 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
FREM3P0C091 AC135068.4-201ENST00000622949 925 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.53□□□□□ -1.36
FREM3P0C091 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.53□□□□□ -1.36
FREM3P0C091 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
FREM3P0C091 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
FREM3P0C091 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
FREM3P0C091 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
FREM3P0C091 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
FREM3P0C091 BX322650.1-201ENST00000332359 2143 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.53□□□□□ -1.36
FREM3P0C091 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.53□□□□□ -1.36
FREM3P0C091 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
FREM3P0C091 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
FREM3P0C091 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
FREM3P0C091 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
FREM3P0C091 FAUP2-201ENST00000394301 401 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 BCRP8-201ENST00000412037 255 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 DDX10P2-201ENST00000417796 2614 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 AF274573.1-201ENST00000430535 494 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 RPL36AP55-201ENST00000454114 305 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.53□□□□□ -1.36
FREM3P0C091 AC024451.1-201ENST00000508013 779 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 OR5M6P-201ENST00000530227 937 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 RN7SL131P-201ENST00000579043 256 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.53□□□□□ -1.36
FREM3P0C091 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
FREM3P0C091 AC073263.3-201ENST00000624449 858 ntBASIC6.53□□□□□ -1.36
FREM3P0C091 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.53□□□□□ -1.36
FREM3P0C091 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
FREM3P0C091 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
FREM3P0C091 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
FREM3P0C091 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC6.53□□□□□ -1.36
FREM3P0C091 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC6.53□□□□□ -1.36
FREM3P0C091 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
FREM3P0C091 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
FREM3P0C091 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms