Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 AC009518.3-201ENST00000438972 253 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 RPS7P11-201ENST00000484240 586 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 AC146944.3-201ENST00000509969 371 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 SETP17-201ENST00000534163 817 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 ULK4P1-202ENST00000565174 503 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 AC005858.3-201ENST00000624756 589 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 AP002800.1-201ENST00000624982 2225 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 RNU1-5P-201ENST00000362684 144 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 RNA5SP172-201ENST00000365061 118 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 AC092634.1-201ENST00000366505 199 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 AC245036.1-201ENST00000391727 309 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 OOSP1-201ENST00000398992 1270 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 RPLP1P10-201ENST00000413972 339 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 AC018804.1-201ENST00000430381 618 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 AC083806.1-201ENST00000468934 316 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 RN7SL379P-201ENST00000479912 293 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 BCAS2P1-201ENST00000528022 632 ntBASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
CDK5RAP2Q96SN8 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 CTH-203ENST00000411986 2044 ntTSL 2 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 AL590635.1-201ENST00000406314 586 ntBASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 AC006509.1-201ENST00000420788 634 ntBASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 AC096632.2-201ENST00000438139 1239 ntBASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 HMGN1P6-201ENST00000438508 291 ntBASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 SNORA81.1-201ENST00000458922 177 ntBASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 RN7SKP198-201ENST00000459286 306 ntBASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 AC005165.2-201ENST00000466070 380 ntBASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 RN7SL868P-201ENST00000485915 303 ntBASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC8.31□□□□□ -1.08
CDK5RAP2Q96SN8 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms