Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AC103968.1-201ENST00000557841 573 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AC105275.2-201ENST00000567907 711 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 MIR5192-201ENST00000579892 92 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AC004852.1-201ENST00000605206 154 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 CUX2P1-201ENST00000606426 298 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 SF3A3P1-201ENST00000446317 1477 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AL133243.4-201ENST00000623116 3109 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AC084782.1-201ENST00000564401 2465 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AC093829.1-201ENST00000506662 1618 ntBASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DRB4X5D2U9 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 LCOR-201ENST00000286067 4542 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 EIF3EP2-201ENST00000423042 1814 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 PPIAP22-201ENST00000358455 498 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 LARP1P1-201ENST00000407692 292 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 LSM5-202ENST00000409292 538 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 IFNA12P-201ENST00000413147 571 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 GAPDHP73-201ENST00000423411 1007 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 GYG1P2-201ENST00000426437 1006 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 HBBP1-201ENST00000433329 439 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AC244505.2-201ENST00000435089 759 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 IGKV1OR2-2-201ENST00000451163 355 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AC090680.1-201ENST00000464696 860 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 RPS2P25-201ENST00000467247 580 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 RPS14P7-201ENST00000473701 448 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 RN7SL338P-201ENST00000481467 293 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AC008799.2-201ENST00000484429 647 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 RPL12P7-201ENST00000493832 494 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AC006070.1-201ENST00000508151 193 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 OR7E1P-201ENST00000533891 958 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 OR4F28P-201ENST00000559128 938 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 RN7SL786P-201ENST00000579130 298 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 MIR3187-201ENST00000583431 70 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 OR4F8P-201ENST00000589943 937 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AC013731.1-201ENST00000604340 883 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 U47924.1-201ENST00000606539 434 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 METAP1-212ENST00000625963 147 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 SNORA43.5-201ENST00000631270 138 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 AC233280.20-201ENST00000637412 416 ntBASIC5.54□□□□□ -1.52
HLA-DRB4X5D2U9 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms