Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 CTAGE3P-201ENST00000454280 2404 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 SNORA70I-201ENST00000384544 135 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 TERF1P4-201ENST00000399580 1115 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AL358178.1-201ENST00000407698 397 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 EIF4A1P13-201ENST00000415667 230 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 MRPL50P1-201ENST00000431951 384 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AC000362.1-201ENST00000433725 425 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AL161454.1-201ENST00000446226 569 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AC016489.1-201ENST00000461109 375 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AC113352.1-201ENST00000513196 666 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AP001636.1-201ENST00000531997 1122 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AP003174.3-201ENST00000537926 516 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AL049838.1-201ENST00000563647 981 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 MIR5705-201ENST00000579870 89 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 STARD6-204ENST00000584040 660 ntTSL 3 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AC005262.1-201ENST00000588562 362 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AC140658.6-201ENST00000603958 201 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AC009974.1-201ENST00000608881 455 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AC084782.3-201ENST00000612282 578 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AL445493.3-201ENST00000619568 477 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AC087072.2-201ENST00000621060 682 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AC099654.8-201ENST00000637757 681 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 AC022150.4-201ENST00000598322 2848 ntBASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM48Q8IWZ4 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AL161891.1-201ENST00000621575 4636 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 NF1P7-201ENST00000612076 1530 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 RNA5SP23-201ENST00000391006 105 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 OR7E91P-201ENST00000400027 866 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 GTF2IP5-201ENST00000414608 731 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 SLC25A24P1-202ENST00000434803 1220 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 PHBP4-201ENST00000437447 837 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AC140479.1-201ENST00000440423 337 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 RPS18P13-201ENST00000461260 454 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AP002371.1-201ENST00000463604 433 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AC022730.2-201ENST00000465359 452 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 RPL34P22-201ENST00000468193 318 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AC087385.2-201ENST00000477729 498 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 RN7SL335P-201ENST00000482790 304 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 RN7SL647P-201ENST00000485429 300 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 RN7SL388P-201ENST00000498736 339 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 OR7E83P-201ENST00000511021 970 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms