Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RPAP1-202ENST00000561603 3906 ntTSL 5 BASIC9.44□□□□□ -0.9
ALDH1A1P00352 DDX18P5-201ENST00000534547 1306 ntBASIC9.44□□□□□ -0.9
ALDH1A1P00352 FAM222B-201ENST00000341217 4033 ntTSL 5 BASIC9.44□□□□□ -0.9
ALDH1A1P00352 AC008124.1-201ENST00000609803 9730 ntBASIC9.44□□□□□ -0.9
ALDH1A1P00352 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
ALDH1A1P00352 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
ALDH1A1P00352 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
ALDH1A1P00352 AC019330.1-201ENST00000637390 1692 ntTSL 5 BASIC9.44□□□□□ -0.9
ALDH1A1P00352 CYP4A11-203ENST00000371905 1725 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
ALDH1A1P00352 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
ALDH1A1P00352 IKZF2-202ENST00000374319 2001 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
ALDH1A1P00352 TMEM108-AS1-202ENST00000505721 2427 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
ALDH1A1P00352 ADAM2-202ENST00000347580 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
ALDH1A1P00352 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
ALDH1A1P00352 AL731563.3-201ENST00000608005 3005 ntTSL 2 BASIC9.44□□□□□ -0.9
ALDH1A1P00352 ARFIP1-205ENST00000451320 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
ALDH1A1P00352 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
ALDH1A1P00352 CASC15-203ENST00000605917 4461 ntBASIC9.44□□□□□ -0.9
ALDH1A1P00352 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
ALDH1A1P00352 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
ALDH1A1P00352 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 STEAP3-201ENST00000393106 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALDH1A1P00352 AL353588.1-201ENST00000505802 3513 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 AGMO-201ENST00000342526 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALDH1A1P00352 BAAT-202ENST00000395051 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALDH1A1P00352 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALDH1A1P00352 RSL24D1-201ENST00000260443 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALDH1A1P00352 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALDH1A1P00352 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALDH1A1P00352 AC010200.1-201ENST00000547380 1454 ntBASIC9.43□□□□□ -0.9
ALDH1A1P00352 NTNG2-201ENST00000372179 3984 ntTSL 5 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALDH1A1P00352 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 RNA5SP218-201ENST00000363188 109 ntBASIC9.43□□□□□ -0.9
ALDH1A1P00352 FHL1-203ENST00000370676 833 ntTSL 5 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 EIF4A1P5-201ENST00000428062 1095 ntBASIC9.43□□□□□ -0.9
ALDH1A1P00352 AC012506.4-202ENST00000430051 572 ntTSL 5 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 MTAPP2-201ENST00000437063 832 ntBASIC9.43□□□□□ -0.9
ALDH1A1P00352 AC239800.1-201ENST00000442049 719 ntBASIC9.43□□□□□ -0.9
ALDH1A1P00352 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 AC119428.2-201ENST00000449958 850 ntTSL 2 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 RN7SKP198-201ENST00000459286 306 ntBASIC9.43□□□□□ -0.9
ALDH1A1P00352 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 RPL7AP30-201ENST00000482859 796 ntBASIC9.43□□□□□ -0.9
ALDH1A1P00352 RPL7AP26-201ENST00000488538 813 ntBASIC9.43□□□□□ -0.9
ALDH1A1P00352 AC080188.1-201ENST00000491923 567 ntBASIC9.43□□□□□ -0.9
ALDH1A1P00352 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 IGLV1-41-201ENST00000519790 406 ntBASIC9.43□□□□□ -0.9
ALDH1A1P00352 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALDH1A1P00352 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 AL512347.1-201ENST00000566420 503 ntBASIC9.43□□□□□ -0.9
ALDH1A1P00352 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 ELOCP28-201ENST00000590044 317 ntBASIC9.43□□□□□ -0.9
ALDH1A1P00352 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 AC093673.2-201ENST00000609674 331 ntBASIC9.43□□□□□ -0.9
ALDH1A1P00352 AC040978.1-201ENST00000617244 1282 ntBASIC9.43□□□□□ -0.9
ALDH1A1P00352 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 ZNF345-206ENST00000529555 3527 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALDH1A1P00352 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ALDH1A1P00352 CORO2B-203ENST00000543950 3611 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 CLDN8-201ENST00000399899 2068 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALDH1A1P00352 MLLT3-209ENST00000629733 3264 ntTSL 5 BASIC9.43□□□□□ -0.9
ALDH1A1P00352 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ALDH1A1P00352 CLEC4M-201ENST00000248228 1865 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 CHRNA6-205ENST00000534622 1872 ntTSL 2 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 LINC02245-201ENST00000449259 2928 ntTSL 5 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 YES1P1-201ENST00000418510 1628 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 FMO9P-202ENST00000488458 1535 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 COL21A1-201ENST00000244728 4339 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 FCGR3B-201ENST00000294800 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 DDX6P1-205ENST00000441966 1436 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC9.42□□□□□ -0.9
ALDH1A1P00352 MCTP1-201ENST00000312216 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 SAXO2-201ENST00000339465 3134 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ALDH1A1P00352 AC023490.2-201ENST00000359859 470 ntBASIC9.42□□□□□ -0.9
ALDH1A1P00352 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms