Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 GTF2IP11-201ENST00000526931 420 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 VDAC2P2-201ENST00000544463 901 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 NUTF2P2-201ENST00000551207 384 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SSX3Q99909 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC6.34□□□□□ -1.39
SSX3Q99909 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.34□□□□□ -1.39
SSX3Q99909 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.34□□□□□ -1.39
SSX3Q99909 LINC02132-201ENST00000598933 750 ntTSL 2 BASIC6.34□□□□□ -1.39
SSX3Q99909 AL592504.1-201ENST00000605319 439 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 AL137246.1-201ENST00000607072 977 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 AC000068.3-201ENST00000607934 427 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 7SK.12-201ENST00000612820 244 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 C18orf12-201ENST00000623329 537 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 AC007224.2-201ENST00000625011 510 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 RPL36AP21-202ENST00000639134 430 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 AC132825.8-201ENST00000640783 297 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.34□□□□□ -1.39
SSX3Q99909 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC6.34□□□□□ -1.39
SSX3Q99909 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 AC087203.2-201ENST00000526502 1587 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC6.34□□□□□ -1.4
SSX3Q99909 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
SSX3Q99909 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC6.34□□□□□ -1.4
SSX3Q99909 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.34□□□□□ -1.4
SSX3Q99909 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSX3Q99909 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSX3Q99909 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSX3Q99909 AC090220.1-201ENST00000593078 1699 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 THAP12P7-201ENST00000520248 2290 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
SSX3Q99909 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSX3Q99909 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSX3Q99909 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC6.33□□□□□ -1.4
SSX3Q99909 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSX3Q99909 AL080312.1-201ENST00000256654 824 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SSX3Q99909 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SSX3Q99909 U3.1-201ENST00000362500 215 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 RNA5SP483-201ENST00000363431 118 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 RNA5SP378-201ENST00000363646 120 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 RN7SKP50-201ENST00000364694 315 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 AL450124.1-201ENST00000376401 353 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 RNU1-11P-201ENST00000383975 164 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 NFU1P1-201ENST00000413128 774 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC6.33□□□□□ -1.4
SSX3Q99909 HBBP1-201ENST00000433329 439 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 AC013410.1-201ENST00000436223 1232 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 AC231532.1-201ENST00000438584 312 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SSX3Q99909 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.33□□□□□ -1.4
SSX3Q99909 ASPA-202ENST00000456349 1090 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSX3Q99909 AC109439.1-201ENST00000511236 715 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.33□□□□□ -1.4
SSX3Q99909 IGHV7-40-201ENST00000520963 296 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 PTTG3P-201ENST00000521862 606 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC6.33□□□□□ -1.4
SSX3Q99909 AP000435.1-201ENST00000528539 496 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC6.33□□□□□ -1.4
SSX3Q99909 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC6.33□□□□□ -1.4
SSX3Q99909 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC6.33□□□□□ -1.4
SSX3Q99909 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC6.33□□□□□ -1.4
SSX3Q99909 MIR4258-201ENST00000580920 91 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC6.33□□□□□ -1.4
SSX3Q99909 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.33□□□□□ -1.4
SSX3Q99909 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC6.33□□□□□ -1.4
SSX3Q99909 OR6L2P-201ENST00000608207 925 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC6.33□□□□□ -1.4
SSX3Q99909 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.33□□□□□ -1.4
SSX3Q99909 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.33□□□□□ -1.4
SSX3Q99909 FAM184A-213ENST00000617072 1251 ntTSL 2 BASIC6.33□□□□□ -1.4
SSX3Q99909 AC027348.2-201ENST00000624375 642 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SSX3Q99909 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSX3Q99909 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.33□□□□□ -1.4
SSX3Q99909 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.33□□□□□ -1.4
SSX3Q99909 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.33□□□□□ -1.4
SSX3Q99909 AL022323.4-201ENST00000623980 13120 ntBASIC6.33□□□□□ -1.4
SSX3Q99909 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSX3Q99909 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSX3Q99909 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC6.33□□□□□ -1.4
SSX3Q99909 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSX3Q99909 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSX3Q99909 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSX3Q99909 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSX3Q99909 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX3Q99909 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX3Q99909 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSX3Q99909 TRAF6P1-201ENST00000429404 1558 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX3Q99909 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSX3Q99909 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX3Q99909 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms