Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 HIGD1AP9-201ENST00000550710 279 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 GNG2-215ENST00000557376 573 ntTSL 4 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 AC097381.3-201ENST00000608962 462 ntBASIC6.54□□□□□ -1.36
HLA-DOBP13765 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-DOBP13765 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-DOBP13765 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-DOBP13765 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-DOBP13765 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-DOBP13765 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-DOBP13765 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.54□□□□□ -1.36
HLA-DOBP13765 MTCO1P46-201ENST00000451639 1491 ntBASIC6.53□□□□□ -1.36
HLA-DOBP13765 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-DOBP13765 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-DOBP13765 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-DOBP13765 RNU1-38P-201ENST00000362817 144 ntBASIC6.53□□□□□ -1.36
HLA-DOBP13765 RNA5SP218-201ENST00000363188 109 ntBASIC6.53□□□□□ -1.36
HLA-DOBP13765 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-DOBP13765 SMC4P1-201ENST00000414479 527 ntBASIC6.53□□□□□ -1.36
HLA-DOBP13765 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 GEMIN2P2-201ENST00000418195 715 ntBASIC6.53□□□□□ -1.36
HLA-DOBP13765 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 TPTE2P1-204ENST00000435256 593 ntBASIC6.53□□□□□ -1.36
HLA-DOBP13765 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-DOBP13765 AL136981.1-203ENST00000451452 3844 ntBASIC6.53□□□□□ -1.36
HLA-DOBP13765 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 RN7SL445P-201ENST00000495609 293 ntBASIC6.53□□□□□ -1.36
HLA-DOBP13765 HSPE1P10-201ENST00000508631 558 ntBASIC6.53□□□□□ -1.36
HLA-DOBP13765 AC022784.5-201ENST00000522241 437 ntBASIC6.53□□□□□ -1.36
HLA-DOBP13765 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-DOBP13765 BMS1P16-201ENST00000556075 1147 ntBASIC6.53□□□□□ -1.36
HLA-DOBP13765 AC105036.1-201ENST00000566222 271 ntBASIC6.53□□□□□ -1.36
HLA-DOBP13765 AC012181.2-201ENST00000570210 699 ntBASIC6.53□□□□□ -1.36
HLA-DOBP13765 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 MIR6807-201ENST00000621968 92 ntBASIC6.53□□□□□ -1.36
HLA-DOBP13765 AC002044.3-201ENST00000623314 541 ntBASIC6.53□□□□□ -1.36
HLA-DOBP13765 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-DOBP13765 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-DOBP13765 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-DOBP13765 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-DOBP13765 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 AC138915.4-201ENST00000565549 4147 ntBASIC6.53□□□□□ -1.36
HLA-DOBP13765 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-DOBP13765 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-DOBP13765 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-DOBP13765 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-DOBP13765 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-DOBP13765 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-DOBP13765 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
HLA-DOBP13765 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.53□□□□□ -1.36
HLA-DOBP13765 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-DOBP13765 AL136298.2-201ENST00000556497 1570 ntBASIC6.52□□□□□ -1.36
HLA-DOBP13765 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
HLA-DOBP13765 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
HLA-DOBP13765 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
HLA-DOBP13765 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-DOBP13765 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.52□□□□□ -1.37
HLA-DOBP13765 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.52□□□□□ -1.37
HLA-DOBP13765 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-DOBP13765 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-DOBP13765 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-DOBP13765 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.52□□□□□ -1.37
HLA-DOBP13765 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-DOBP13765 AL157713.1-201ENST00000379752 1531 ntBASIC6.52□□□□□ -1.37
HLA-DOBP13765 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-DOBP13765 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.52□□□□□ -1.37
HLA-DOBP13765 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.52□□□□□ -1.37
HLA-DOBP13765 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-DOBP13765 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-DOBP13765 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
HLA-DOBP13765 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-DOBP13765 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-DOBP13765 RPL5P5-201ENST00000392009 893 ntBASIC6.52□□□□□ -1.37
HLA-DOBP13765 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms