Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AL035563.1-201ENST00000609087 1539 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.91□□□□□ -1.3
SCN2BO60939 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
SCN2BO60939 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
SCN2BO60939 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 SAMMSON-203ENST00000641005 2168 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
SCN2BO60939 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SCN2BO60939 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SCN2BO60939 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.91□□□□□ -1.3
SCN2BO60939 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SCN2BO60939 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC6.91□□□□□ -1.3
SCN2BO60939 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC6.91□□□□□ -1.3
SCN2BO60939 NUCKS1P1-201ENST00000452067 703 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 RPS29P5-201ENST00000452777 171 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 RPS18P13-201ENST00000461260 454 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 RN7SL508P-201ENST00000464472 303 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.91□□□□□ -1.3
SCN2BO60939 RPL5P3-201ENST00000493817 889 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 RN7SL519P-201ENST00000497925 288 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 AC026700.1-201ENST00000512074 544 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 AC114801.1-201ENST00000512633 297 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 AC027801.3-201ENST00000515049 698 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.91□□□□□ -1.3
SCN2BO60939 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
SCN2BO60939 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
SCN2BO60939 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC6.91□□□□□ -1.3
SCN2BO60939 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SCN2BO60939 TUBAP4-201ENST00000569261 416 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC6.91□□□□□ -1.3
SCN2BO60939 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 RN7SL760P-201ENST00000607344 270 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.91□□□□□ -1.3
SCN2BO60939 AP005329.3-201ENST00000609924 686 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 AC080112.3-201ENST00000612552 880 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 MIR6732-201ENST00000619365 60 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC6.91□□□□□ -1.3
SCN2BO60939 CASC19-232ENST00000641480 1244 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 AL596275.2-203ENST00000641951 371 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.91□□□□□ -1.3
SCN2BO60939 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.91□□□□□ -1.3
SCN2BO60939 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.91□□□□□ -1.3
SCN2BO60939 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.91□□□□□ -1.3
SCN2BO60939 AL391262.1-201ENST00000556558 1992 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
SCN2BO60939 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 AC110716.2-201ENST00000563865 3945 ntBASIC6.91□□□□□ -1.3
SCN2BO60939 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
SCN2BO60939 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.91□□□□□ -1.3
SCN2BO60939 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCN2BO60939 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SCN2BO60939 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
SCN2BO60939 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC6.9□□□□□ -1.3
SCN2BO60939 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SCN2BO60939 AC092111.1-201ENST00000618256 3358 ntBASIC6.9□□□□□ -1.3
SCN2BO60939 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SCN2BO60939 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.9□□□□□ -1.3
SCN2BO60939 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SCN2BO60939 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SCN2BO60939 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SCN2BO60939 RNU1-21P-201ENST00000363327 163 ntBASIC6.9□□□□□ -1.3
SCN2BO60939 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
SCN2BO60939 RBBP4P4-201ENST00000398588 1289 ntBASIC6.9□□□□□ -1.3
SCN2BO60939 SUMO2P13-201ENST00000403109 272 ntBASIC6.9□□□□□ -1.3
SCN2BO60939 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC6.9□□□□□ -1.3
SCN2BO60939 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC6.9□□□□□ -1.3
SCN2BO60939 AL451074.4-201ENST00000447545 470 ntBASIC6.9□□□□□ -1.3
SCN2BO60939 RN7SL549P-201ENST00000478997 282 ntBASIC6.9□□□□□ -1.3
SCN2BO60939 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC6.9□□□□□ -1.3
SCN2BO60939 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC6.9□□□□□ -1.3
SCN2BO60939 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.9□□□□□ -1.3
SCN2BO60939 AC138866.1-201ENST00000514522 497 ntBASIC6.9□□□□□ -1.3
SCN2BO60939 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC6.9□□□□□ -1.3
SCN2BO60939 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
SCN2BO60939 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC6.9□□□□□ -1.3
SCN2BO60939 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC6.9□□□□□ -1.3
SCN2BO60939 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC6.9□□□□□ -1.3
SCN2BO60939 RN7SL835P-201ENST00000579920 262 ntBASIC6.9□□□□□ -1.3
SCN2BO60939 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.9□□□□□ -1.3
SCN2BO60939 AC005495.1-201ENST00000586611 1211 ntBASIC6.9□□□□□ -1.3
SCN2BO60939 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC6.9□□□□□ -1.3
SCN2BO60939 CRYAB-216ENST00000616970 977 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
SCN2BO60939 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms