Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 RIT1-201ENST00000368322 855 ntTSL 3 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 PDCL3P7-201ENST00000392251 712 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 TERF1P4-201ENST00000399580 1115 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 UPF3AP1-201ENST00000413731 1126 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 MICU1-204ENST00000418483 1212 ntTSL 2 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 PHB2P1-201ENST00000434943 890 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 LINC01865-202ENST00000436808 853 ntTSL 5 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AL109945.1-201ENST00000448134 687 ntTSL 2 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 NUCKS1P1-201ENST00000452067 703 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 TDGF1P6-201ENST00000463873 448 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 KCNAB1-AS1-201ENST00000467794 456 ntTSL 2 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 RN7SL630P-201ENST00000483714 297 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 RN7SL130P-201ENST00000489463 305 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AC098583.2-201ENST00000504151 372 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 MTCO3P42-201ENST00000509488 518 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 MTCO3P39-201ENST00000514812 518 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 LINC00499-204ENST00000515282 579 ntTSL 5 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 HDAC2-AS2-211ENST00000520034 790 ntTSL 3 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AC079866.1-201ENST00000534985 1220 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AP4S1-206ENST00000554609 1012 ntTSL 5 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 LINC00556-201ENST00000569603 412 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 RN7SL785P-201ENST00000578437 253 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AP001178.2-201ENST00000580007 326 ntTSL 3 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AL035417.2-201ENST00000603887 796 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 NF1P10-201ENST00000613227 742 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 Metazoa_SRP.169-201ENST00000613708 283 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AL391987.5-201ENST00000618472 412 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AC048380.3-201ENST00000623145 796 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AL356095.2-201ENST00000624025 457 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AC024475.4-201ENST00000635144 1206 ntTSL 5 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AC007406.5-201ENST00000570140 3170 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AC132219.2-201ENST00000624416 2327 ntBASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
HMGB1P1B2RPK0 AF064858.1-201ENST00000417335 1412 ntTSL 5 BASIC7.52□□□□□ -1.2
HMGB1P1B2RPK0 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
HMGB1P1B2RPK0 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.52□□□□□ -1.2
HMGB1P1B2RPK0 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.52□□□□□ -1.2
HMGB1P1B2RPK0 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 MITF-202ENST00000314589 1993 ntTSL 2 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 UBE2U-206ENST00000611228 1550 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 RNA5SP250-201ENST00000362534 119 ntBASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 U3.48-201ENST00000363172 216 ntBASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 TMSB10P1-201ENST00000415070 132 ntBASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 RPL35P8-201ENST00000433284 337 ntBASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 ARAFP2-201ENST00000440565 559 ntBASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 MTND6P15-201ENST00000441157 521 ntBASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 IFITM4P-207ENST00000441380 420 ntBASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 RPSAP64-201ENST00000451820 336 ntBASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 BZW1P1-201ENST00000454901 1240 ntBASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 PDE4D-209ENST00000502575 1040 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 NPY6R-201ENST00000503807 1112 ntBASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 PPM1K-204ENST00000508256 923 ntTSL 2 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 TMEM107-209ENST00000533070 726 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 BMS1P15-201ENST00000554269 1141 ntBASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 IGHV1OR15-4-201ENST00000560037 348 ntBASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 NUTF2P6-201ENST00000560892 385 ntBASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
HMGB1P1B2RPK0 uc_338.27-201ENST00000611385 169 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms