Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
COMMD3-BMI1R4GMX3 AL133373.2-201ENST00000623187 2828 ntBASIC18.77■□□□□ 0.59
COMMD3-BMI1R4GMX3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 IGHV3-19-201ENST00000521488 291 ntBASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 AC126544.1-201ENST00000580842 1059 ntBASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COMMD3-BMI1R4GMX3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COMMD3-BMI1R4GMX3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.75■□□□□ 0.59
COMMD3-BMI1R4GMX3 AC093484.2-201ENST00000580996 2166 ntBASIC18.75■□□□□ 0.59
COMMD3-BMI1R4GMX3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
COMMD3-BMI1R4GMX3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.75■□□□□ 0.59
COMMD3-BMI1R4GMX3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COMMD3-BMI1R4GMX3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.75■□□□□ 0.59
COMMD3-BMI1R4GMX3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.75■□□□□ 0.59
COMMD3-BMI1R4GMX3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COMMD3-BMI1R4GMX3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.75■□□□□ 0.59
COMMD3-BMI1R4GMX3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COMMD3-BMI1R4GMX3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COMMD3-BMI1R4GMX3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.75■□□□□ 0.59
COMMD3-BMI1R4GMX3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 AL390961.4-201ENST00000623958 2535 ntBASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COMMD3-BMI1R4GMX3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COMMD3-BMI1R4GMX3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3-BMI1R4GMX3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms