Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PTCH2Q9Y6C5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PTCH2Q9Y6C5 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC22.73■■□□□ 1.23
PTCH2Q9Y6C5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.73■■□□□ 1.23
PTCH2Q9Y6C5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC22.73■■□□□ 1.23
PTCH2Q9Y6C5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC22.73■■□□□ 1.23
PTCH2Q9Y6C5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PTCH2Q9Y6C5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
PTCH2Q9Y6C5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.73■■□□□ 1.23
PTCH2Q9Y6C5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC22.73■■□□□ 1.23
PTCH2Q9Y6C5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PTCH2Q9Y6C5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PTCH2Q9Y6C5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PTCH2Q9Y6C5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.73■■□□□ 1.23
PTCH2Q9Y6C5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
PTCH2Q9Y6C5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.72■■□□□ 1.23
PTCH2Q9Y6C5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCH2Q9Y6C5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCH2Q9Y6C5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PTCH2Q9Y6C5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCH2Q9Y6C5 RNF152P1-201ENST00000397754 604 ntBASIC22.72■■□□□ 1.23
PTCH2Q9Y6C5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC22.72■■□□□ 1.23
PTCH2Q9Y6C5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.72■■□□□ 1.23
PTCH2Q9Y6C5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
PTCH2Q9Y6C5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC22.72■■□□□ 1.23
PTCH2Q9Y6C5 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.72■■□□□ 1.23
PTCH2Q9Y6C5 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC22.72■■□□□ 1.23
PTCH2Q9Y6C5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.72■■□□□ 1.23
PTCH2Q9Y6C5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCH2Q9Y6C5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PTCH2Q9Y6C5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PTCH2Q9Y6C5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PTCH2Q9Y6C5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.71■■□□□ 1.23
PTCH2Q9Y6C5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
PTCH2Q9Y6C5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC22.71■■□□□ 1.23
PTCH2Q9Y6C5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC22.71■■□□□ 1.23
PTCH2Q9Y6C5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC22.71■■□□□ 1.23
PTCH2Q9Y6C5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC22.71■■□□□ 1.23
PTCH2Q9Y6C5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC22.71■■□□□ 1.23
PTCH2Q9Y6C5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
PTCH2Q9Y6C5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PTCH2Q9Y6C5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PTCH2Q9Y6C5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC22.71■■□□□ 1.23
PTCH2Q9Y6C5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PTCH2Q9Y6C5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PTCH2Q9Y6C5 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.23
PTCH2Q9Y6C5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCH2Q9Y6C5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCH2Q9Y6C5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCH2Q9Y6C5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCH2Q9Y6C5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCH2Q9Y6C5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC22.7■■□□□ 1.22
PTCH2Q9Y6C5 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.7■■□□□ 1.22
PTCH2Q9Y6C5 B3GAT3P1-201ENST00000471720 806 ntBASIC22.7■■□□□ 1.22
PTCH2Q9Y6C5 AC097488.1-201ENST00000507834 756 ntBASIC22.7■■□□□ 1.22
PTCH2Q9Y6C5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC22.7■■□□□ 1.22
PTCH2Q9Y6C5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC22.7■■□□□ 1.22
PTCH2Q9Y6C5 DGCR10-201ENST00000609839 495 ntBASIC22.7■■□□□ 1.22
PTCH2Q9Y6C5 AC093458.2-201ENST00000623150 629 ntBASIC22.7■■□□□ 1.22
PTCH2Q9Y6C5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
PTCH2Q9Y6C5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PTCH2Q9Y6C5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCH2Q9Y6C5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCH2Q9Y6C5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PTCH2Q9Y6C5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PTCH2Q9Y6C5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
PTCH2Q9Y6C5 PCED1CP-201ENST00000419887 785 ntBASIC22.69■■□□□ 1.22
PTCH2Q9Y6C5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC22.69■■□□□ 1.22
PTCH2Q9Y6C5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC22.69■■□□□ 1.22
PTCH2Q9Y6C5 AC026271.3-201ENST00000571884 352 ntBASIC22.69■■□□□ 1.22
PTCH2Q9Y6C5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC22.69■■□□□ 1.22
PTCH2Q9Y6C5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC22.69■■□□□ 1.22
PTCH2Q9Y6C5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22.69■■□□□ 1.22
PTCH2Q9Y6C5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
PTCH2Q9Y6C5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PTCH2Q9Y6C5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.69■■□□□ 1.22
PTCH2Q9Y6C5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PTCH2Q9Y6C5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PTCH2Q9Y6C5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PTCH2Q9Y6C5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.68■■□□□ 1.22
PTCH2Q9Y6C5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PTCH2Q9Y6C5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PTCH2Q9Y6C5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.68■■□□□ 1.22
PTCH2Q9Y6C5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PTCH2Q9Y6C5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.68■■□□□ 1.22
PTCH2Q9Y6C5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PTCH2Q9Y6C5 AC011506.1-201ENST00000474329 610 ntBASIC22.68■■□□□ 1.22
PTCH2Q9Y6C5 YBX1P2-201ENST00000489612 999 ntBASIC22.68■■□□□ 1.22
PTCH2Q9Y6C5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PTCH2Q9Y6C5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
PTCH2Q9Y6C5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.68■■□□□ 1.22
PTCH2Q9Y6C5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PTCH2Q9Y6C5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.67■■□□□ 1.22
PTCH2Q9Y6C5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
PTCH2Q9Y6C5 AC242852.2-201ENST00000615738 1807 ntBASIC22.67■■□□□ 1.22
PTCH2Q9Y6C5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
PTCH2Q9Y6C5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PTCH2Q9Y6C5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.67■■□□□ 1.22
PTCH2Q9Y6C5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
PTCH2Q9Y6C5 HMGA1P5-201ENST00000412453 271 ntBASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms