Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC6Q9Y625 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.89■□□□□ 0.61
GPC6Q9Y625 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC6Q9Y625 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GPC6Q9Y625 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.89■□□□□ 0.61
GPC6Q9Y625 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.89■□□□□ 0.61
GPC6Q9Y625 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
GPC6Q9Y625 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.89■□□□□ 0.61
GPC6Q9Y625 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.89■□□□□ 0.61
GPC6Q9Y625 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.89■□□□□ 0.61
GPC6Q9Y625 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC6Q9Y625 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC6Q9Y625 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
GPC6Q9Y625 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
GPC6Q9Y625 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC6Q9Y625 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.89■□□□□ 0.61
GPC6Q9Y625 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC6Q9Y625 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
GPC6Q9Y625 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC6Q9Y625 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.88■□□□□ 0.61
GPC6Q9Y625 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC6Q9Y625 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC6Q9Y625 AFG3L1P-217ENST00000557444 2447 ntBASIC18.88■□□□□ 0.61
GPC6Q9Y625 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
GPC6Q9Y625 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.88■□□□□ 0.61
GPC6Q9Y625 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.88■□□□□ 0.61
GPC6Q9Y625 AC007322.3-201ENST00000426526 701 ntBASIC18.88■□□□□ 0.61
GPC6Q9Y625 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.88■□□□□ 0.61
GPC6Q9Y625 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GPC6Q9Y625 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
GPC6Q9Y625 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.88■□□□□ 0.61
GPC6Q9Y625 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.88■□□□□ 0.61
GPC6Q9Y625 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.88■□□□□ 0.61
GPC6Q9Y625 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC6Q9Y625 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.88■□□□□ 0.61
GPC6Q9Y625 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
GPC6Q9Y625 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC6Q9Y625 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC6Q9Y625 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC6Q9Y625 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC6Q9Y625 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.87■□□□□ 0.61
GPC6Q9Y625 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
GPC6Q9Y625 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC6Q9Y625 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
GPC6Q9Y625 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
GPC6Q9Y625 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
GPC6Q9Y625 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.87■□□□□ 0.61
GPC6Q9Y625 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.87■□□□□ 0.61
GPC6Q9Y625 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC6Q9Y625 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.87■□□□□ 0.61
GPC6Q9Y625 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GPC6Q9Y625 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.87■□□□□ 0.61
GPC6Q9Y625 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.87■□□□□ 0.61
GPC6Q9Y625 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GPC6Q9Y625 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
GPC6Q9Y625 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
GPC6Q9Y625 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.86■□□□□ 0.61
GPC6Q9Y625 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.86■□□□□ 0.61
GPC6Q9Y625 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC6Q9Y625 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC6Q9Y625 KRT8P36-201ENST00000489121 1440 ntBASIC18.86■□□□□ 0.61
GPC6Q9Y625 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC6Q9Y625 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.86■□□□□ 0.61
GPC6Q9Y625 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.86■□□□□ 0.61
GPC6Q9Y625 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.86■□□□□ 0.61
GPC6Q9Y625 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.86■□□□□ 0.61
GPC6Q9Y625 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.86■□□□□ 0.61
GPC6Q9Y625 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
GPC6Q9Y625 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GPC6Q9Y625 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.86■□□□□ 0.61
GPC6Q9Y625 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.86■□□□□ 0.61
GPC6Q9Y625 TCF3P1-201ENST00000423021 1937 ntBASIC18.86■□□□□ 0.61
GPC6Q9Y625 AC018445.3-201ENST00000624177 1945 ntBASIC18.86■□□□□ 0.61
GPC6Q9Y625 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC6Q9Y625 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC6Q9Y625 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC6Q9Y625 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GPC6Q9Y625 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC6Q9Y625 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GPC6Q9Y625 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC6Q9Y625 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC6Q9Y625 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
GPC6Q9Y625 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GPC6Q9Y625 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
GPC6Q9Y625 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
GPC6Q9Y625 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC6Q9Y625 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC6Q9Y625 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GPC6Q9Y625 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
GPC6Q9Y625 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC6Q9Y625 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC6Q9Y625 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPC6Q9Y625 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.85■□□□□ 0.61
GPC6Q9Y625 BID-214ENST00000617586 542 ntTSL 5 BASIC18.85■□□□□ 0.61
GPC6Q9Y625 AC010536.3-201ENST00000620306 533 ntBASIC18.85■□□□□ 0.61
GPC6Q9Y625 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
GPC6Q9Y625 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.85■□□□□ 0.61
GPC6Q9Y625 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
GPC6Q9Y625 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.85■□□□□ 0.61
GPC6Q9Y625 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms