Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 IKBKGP1-201ENST00000612193 1073 ntBASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 AC105020.6-201ENST00000621523 1217 ntBASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGA11Q9Y5H2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGA11Q9Y5H2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGA11Q9Y5H2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.39■□□□□ 0.7
PCDHGA11Q9Y5H2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGA11Q9Y5H2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGA11Q9Y5H2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 AC073111.5-205ENST00000641717 521 ntBASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 AC010980.2-201ENST00000587099 1412 ntBASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 AC112907.3-201ENST00000577781 2400 ntBASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA11Q9Y5H2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
PCDHGA11Q9Y5H2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 AC133552.2-202ENST00000575694 574 ntBASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 AL589743.5-201ENST00000616611 1050 ntBASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA11Q9Y5H2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PCDHGA11Q9Y5H2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms