Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB11Q9Y5F2 AC092368.3-202ENST00000574180 1591 ntBASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 C1QBPP2-201ENST00000528754 825 ntBASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB11Q9Y5F2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 PNMA6B-201ENST00000538162 1200 ntBASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB11Q9Y5F2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 RPPH1-201ENST00000516869 333 ntBASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 AC008403.3-201ENST00000598924 454 ntBASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB11Q9Y5F2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB11Q9Y5F2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB11Q9Y5F2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
PCDHB11Q9Y5F2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHB11Q9Y5F2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
PCDHB11Q9Y5F2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
PCDHB11Q9Y5F2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDHB11Q9Y5F2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
PCDHB11Q9Y5F2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHB11Q9Y5F2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB11Q9Y5F2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PCDHB11Q9Y5F2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHB11Q9Y5F2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
PCDHB11Q9Y5F2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB11Q9Y5F2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB11Q9Y5F2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB11Q9Y5F2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.58■□□□□ 0.72
PCDHB11Q9Y5F2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms