Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
AP4S1Q9Y587 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
AP4S1Q9Y587 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
AP4S1Q9Y587 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.9■□□□□ 0.62
AP4S1Q9Y587 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4S1Q9Y587 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4S1Q9Y587 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4S1Q9Y587 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
AP4S1Q9Y587 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.9■□□□□ 0.62
AP4S1Q9Y587 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP4S1Q9Y587 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP4S1Q9Y587 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.9■□□□□ 0.62
AP4S1Q9Y587 RARRES2P11-201ENST00000635158 484 ntBASIC18.9■□□□□ 0.62
AP4S1Q9Y587 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.9■□□□□ 0.62
AP4S1Q9Y587 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.9■□□□□ 0.62
AP4S1Q9Y587 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4S1Q9Y587 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4S1Q9Y587 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP4S1Q9Y587 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.89■□□□□ 0.62
AP4S1Q9Y587 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.89■□□□□ 0.62
AP4S1Q9Y587 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
AP4S1Q9Y587 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP4S1Q9Y587 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.89■□□□□ 0.61
AP4S1Q9Y587 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.89■□□□□ 0.61
AP4S1Q9Y587 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.89■□□□□ 0.61
AP4S1Q9Y587 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP4S1Q9Y587 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
AP4S1Q9Y587 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP4S1Q9Y587 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP4S1Q9Y587 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP4S1Q9Y587 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.89■□□□□ 0.61
AP4S1Q9Y587 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.89■□□□□ 0.61
AP4S1Q9Y587 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.89■□□□□ 0.61
AP4S1Q9Y587 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP4S1Q9Y587 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 AL138781.2-201ENST00000617896 1843 ntBASIC18.88■□□□□ 0.61
AP4S1Q9Y587 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP4S1Q9Y587 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
AP4S1Q9Y587 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP4S1Q9Y587 LINC01465-201ENST00000408887 1940 ntBASIC18.86■□□□□ 0.61
AP4S1Q9Y587 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms