Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 BX119927.1-201ENST00000636596 1552 ntBASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 RARRES2P11-201ENST00000635158 484 ntBASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RCL1Q9Y2P8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RCL1Q9Y2P8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RCL1Q9Y2P8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
RCL1Q9Y2P8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
RCL1Q9Y2P8 AC090340.1-201ENST00000620778 4980 ntBASIC16.33■□□□□ 0.21
RCL1Q9Y2P8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 LETM1P2-201ENST00000597330 2178 ntBASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 IGHV3-19-201ENST00000521488 291 ntBASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RCL1Q9Y2P8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 MIR4466-201ENST00000606121 54 ntBASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RCL1Q9Y2P8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RCL1Q9Y2P8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms