Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.93■■□□□ 1.26
PCDHA4Q9UN74 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
PCDHA4Q9UN74 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHA4Q9UN74 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHA4Q9UN74 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.93■■□□□ 1.26
PCDHA4Q9UN74 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHA4Q9UN74 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.93■■□□□ 1.26
PCDHA4Q9UN74 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHA4Q9UN74 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 AC006557.6-201ENST00000623071 864 ntBASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDHA4Q9UN74 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 KRT16P6-202ENST00000425692 1426 ntBASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 AC073130.3-201ENST00000624389 2278 ntBASIC22.91■■□□□ 1.26
PCDHA4Q9UN74 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 RNA5SP413-201ENST00000516373 109 ntBASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 AC112907.3-201ENST00000577781 2400 ntBASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.9■■□□□ 1.26
PCDHA4Q9UN74 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHA4Q9UN74 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHA4Q9UN74 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.89■■□□□ 1.26
PCDHA4Q9UN74 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHA4Q9UN74 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.89■■□□□ 1.26
PCDHA4Q9UN74 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHA4Q9UN74 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHA4Q9UN74 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHA4Q9UN74 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHA4Q9UN74 TCF3P1-201ENST00000423021 1937 ntBASIC22.89■■□□□ 1.25
PCDHA4Q9UN74 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHA4Q9UN74 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.89■■□□□ 1.25
PCDHA4Q9UN74 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.89■■□□□ 1.25
PCDHA4Q9UN74 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.89■■□□□ 1.25
PCDHA4Q9UN74 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.89■■□□□ 1.25
PCDHA4Q9UN74 UNC93B5-201ENST00000530315 699 ntBASIC22.89■■□□□ 1.25
PCDHA4Q9UN74 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
PCDHA4Q9UN74 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.89■■□□□ 1.25
PCDHA4Q9UN74 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.89■■□□□ 1.25
PCDHA4Q9UN74 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.25
PCDHA4Q9UN74 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
PCDHA4Q9UN74 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.89■■□□□ 1.25
PCDHA4Q9UN74 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.88■■□□□ 1.25
PCDHA4Q9UN74 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHA4Q9UN74 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHA4Q9UN74 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHA4Q9UN74 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms