Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 AC087499.1-201ENST00000418141 1075 ntBASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 AC005829.2-201ENST00000571422 1056 ntBASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NOTCH3Q9UM47 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 PRKY-204ENST00000533551 1019 ntBASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NOTCH3Q9UM47 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 TMPOP1-202ENST00000424642 1267 ntBASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NOTCH3Q9UM47 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
NOTCH3Q9UM47 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms