Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.66■□□□□ 0.74
VTI1BQ9UEU0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTI1BQ9UEU0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VTI1BQ9UEU0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.66■□□□□ 0.74
VTI1BQ9UEU0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTI1BQ9UEU0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTI1BQ9UEU0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 AL020996.1-203ENST00000536896 2307 ntBASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 SLC7A5P2-201ENST00000553010 536 ntBASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 UBE2DNL-204ENST00000602536 740 ntBASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
VTI1BQ9UEU0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.64■□□□□ 0.74
VTI1BQ9UEU0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.64■□□□□ 0.74
VTI1BQ9UEU0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 AL137784.2-201ENST00000607332 1000 ntBASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 AC098818.2-201ENST00000564925 2320 ntBASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VTI1BQ9UEU0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 MYCNOS-205ENST00000641950 531 ntBASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 AC005332.7-201ENST00000614046 2005 ntBASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VTI1BQ9UEU0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.62■□□□□ 0.73
VTI1BQ9UEU0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms