Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
SDHAF3Q9NRP4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SDHAF3Q9NRP4 KRT8P17-201ENST00000453110 1448 ntBASIC18.36■□□□□ 0.53
SDHAF3Q9NRP4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.36■□□□□ 0.53
SDHAF3Q9NRP4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.36■□□□□ 0.53
SDHAF3Q9NRP4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.36■□□□□ 0.53
SDHAF3Q9NRP4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.36■□□□□ 0.53
SDHAF3Q9NRP4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.36■□□□□ 0.53
SDHAF3Q9NRP4 KRT18P6-201ENST00000555540 1265 ntBASIC18.36■□□□□ 0.53
SDHAF3Q9NRP4 AL031963.3-201ENST00000606441 850 ntBASIC18.36■□□□□ 0.53
SDHAF3Q9NRP4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SDHAF3Q9NRP4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.36■□□□□ 0.53
SDHAF3Q9NRP4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.36■□□□□ 0.53
SDHAF3Q9NRP4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SDHAF3Q9NRP4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SDHAF3Q9NRP4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.35■□□□□ 0.53
SDHAF3Q9NRP4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 AC073314.1-201ENST00000568729 2216 ntBASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 RNA5SP413-201ENST00000516373 109 ntBASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 PNMA6B-201ENST00000538162 1200 ntBASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 AC005829.2-201ENST00000571422 1056 ntBASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SDHAF3Q9NRP4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.33■□□□□ 0.53
SDHAF3Q9NRP4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SDHAF3Q9NRP4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SDHAF3Q9NRP4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
SDHAF3Q9NRP4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SDHAF3Q9NRP4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SDHAF3Q9NRP4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SDHAF3Q9NRP4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SDHAF3Q9NRP4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHAF3Q9NRP4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SDHAF3Q9NRP4 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.33■□□□□ 0.52
SDHAF3Q9NRP4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.33■□□□□ 0.52
SDHAF3Q9NRP4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.33■□□□□ 0.52
SDHAF3Q9NRP4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.33■□□□□ 0.52
SDHAF3Q9NRP4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.33■□□□□ 0.52
SDHAF3Q9NRP4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.33■□□□□ 0.52
SDHAF3Q9NRP4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SDHAF3Q9NRP4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.33■□□□□ 0.52
SDHAF3Q9NRP4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHAF3Q9NRP4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SDHAF3Q9NRP4 KRT16P6-202ENST00000425692 1426 ntBASIC18.32■□□□□ 0.52
SDHAF3Q9NRP4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SDHAF3Q9NRP4 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.32■□□□□ 0.52
SDHAF3Q9NRP4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SDHAF3Q9NRP4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SDHAF3Q9NRP4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SDHAF3Q9NRP4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SDHAF3Q9NRP4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SDHAF3Q9NRP4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SDHAF3Q9NRP4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SDHAF3Q9NRP4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.32■□□□□ 0.52
SDHAF3Q9NRP4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.32■□□□□ 0.52
SDHAF3Q9NRP4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SDHAF3Q9NRP4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SDHAF3Q9NRP4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.32■□□□□ 0.52
SDHAF3Q9NRP4 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.32■□□□□ 0.52
SDHAF3Q9NRP4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms