Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 AC068338.2-201ENST00000563278 1430 ntBASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 AC007322.1-201ENST00000426983 750 ntBASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 AC080038.1-201ENST00000611274 1154 ntBASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 AC231657.2-201ENST00000624556 255 ntBASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTPS2Q9NRF8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CTPS2Q9NRF8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CTPS2Q9NRF8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.58■□□□□ 0.57
CTPS2Q9NRF8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTPS2Q9NRF8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.58■□□□□ 0.57
CTPS2Q9NRF8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTPS2Q9NRF8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTPS2Q9NRF8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.58■□□□□ 0.57
CTPS2Q9NRF8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.58■□□□□ 0.57
CTPS2Q9NRF8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTPS2Q9NRF8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.58■□□□□ 0.56
CTPS2Q9NRF8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.58■□□□□ 0.56
CTPS2Q9NRF8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.58■□□□□ 0.56
CTPS2Q9NRF8 AL162412.1-201ENST00000567129 965 ntBASIC18.58■□□□□ 0.56
CTPS2Q9NRF8 FAM21FP-204ENST00000608637 956 ntBASIC18.58■□□□□ 0.56
CTPS2Q9NRF8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.58■□□□□ 0.56
CTPS2Q9NRF8 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.58■□□□□ 0.56
CTPS2Q9NRF8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.58■□□□□ 0.56
CTPS2Q9NRF8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTPS2Q9NRF8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTPS2Q9NRF8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
CTPS2Q9NRF8 RNF165-205ENST00000588679 2904 ntBASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.57■□□□□ 0.56
CTPS2Q9NRF8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 AC073111.5-205ENST00000641717 521 ntBASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.56■□□□□ 0.56
CTPS2Q9NRF8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.55■□□□□ 0.56
CTPS2Q9NRF8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms