Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDF3Q9NR23 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GDF3Q9NR23 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.09■□□□□ 0.97
GDF3Q9NR23 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GDF3Q9NR23 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.09■□□□□ 0.97
GDF3Q9NR23 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
GDF3Q9NR23 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDF3Q9NR23 EEF1DP3-203ENST00000566025 782 ntBASIC21.09■□□□□ 0.97
GDF3Q9NR23 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.09■□□□□ 0.97
GDF3Q9NR23 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDF3Q9NR23 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
GDF3Q9NR23 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GDF3Q9NR23 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GDF3Q9NR23 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GDF3Q9NR23 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.08■□□□□ 0.97
GDF3Q9NR23 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.08■□□□□ 0.97
GDF3Q9NR23 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.08■□□□□ 0.97
GDF3Q9NR23 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GDF3Q9NR23 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GDF3Q9NR23 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GDF3Q9NR23 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.08■□□□□ 0.97
GDF3Q9NR23 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.08■□□□□ 0.97
GDF3Q9NR23 GUSBP6-202ENST00000438529 1198 ntBASIC21.08■□□□□ 0.97
GDF3Q9NR23 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GDF3Q9NR23 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
GDF3Q9NR23 AC010536.3-201ENST00000620306 533 ntBASIC21.08■□□□□ 0.97
GDF3Q9NR23 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GDF3Q9NR23 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.08■□□□□ 0.96
GDF3Q9NR23 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
GDF3Q9NR23 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.08■□□□□ 0.96
GDF3Q9NR23 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.08■□□□□ 0.96
GDF3Q9NR23 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
GDF3Q9NR23 AC004408.2-201ENST00000623613 2777 ntBASIC21.08■□□□□ 0.96
GDF3Q9NR23 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.08■□□□□ 0.96
GDF3Q9NR23 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.07■□□□□ 0.96
GDF3Q9NR23 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF3Q9NR23 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
GDF3Q9NR23 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.07■□□□□ 0.96
GDF3Q9NR23 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF3Q9NR23 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF3Q9NR23 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.07■□□□□ 0.96
GDF3Q9NR23 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GDF3Q9NR23 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
GDF3Q9NR23 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GDF3Q9NR23 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.07■□□□□ 0.96
GDF3Q9NR23 AC053503.5-201ENST00000601508 636 ntBASIC21.07■□□□□ 0.96
GDF3Q9NR23 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.07■□□□□ 0.96
GDF3Q9NR23 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF3Q9NR23 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF3Q9NR23 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF3Q9NR23 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF3Q9NR23 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
GDF3Q9NR23 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF3Q9NR23 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF3Q9NR23 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDF3Q9NR23 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GDF3Q9NR23 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDF3Q9NR23 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.06■□□□□ 0.96
GDF3Q9NR23 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GDF3Q9NR23 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GDF3Q9NR23 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDF3Q9NR23 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDF3Q9NR23 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.06■□□□□ 0.96
GDF3Q9NR23 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.06■□□□□ 0.96
GDF3Q9NR23 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.06■□□□□ 0.96
GDF3Q9NR23 AF201337.1-201ENST00000520239 748 ntBASIC21.06■□□□□ 0.96
GDF3Q9NR23 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
GDF3Q9NR23 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.06■□□□□ 0.96
GDF3Q9NR23 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.06■□□□□ 0.96
GDF3Q9NR23 TMEM191A-211ENST00000637163 1067 ntBASIC21.06■□□□□ 0.96
GDF3Q9NR23 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
GDF3Q9NR23 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDF3Q9NR23 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDF3Q9NR23 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GDF3Q9NR23 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDF3Q9NR23 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.05■□□□□ 0.96
GDF3Q9NR23 TMEM179-206ENST00000616017 1645 ntBASIC21.05■□□□□ 0.96
GDF3Q9NR23 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GDF3Q9NR23 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
GDF3Q9NR23 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
GDF3Q9NR23 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDF3Q9NR23 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDF3Q9NR23 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
GDF3Q9NR23 CNN2P6-201ENST00000439038 900 ntBASIC21.05■□□□□ 0.96
GDF3Q9NR23 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.05■□□□□ 0.96
GDF3Q9NR23 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GDF3Q9NR23 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.05■□□□□ 0.96
GDF3Q9NR23 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.05■□□□□ 0.96
GDF3Q9NR23 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.05■□□□□ 0.96
GDF3Q9NR23 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
GDF3Q9NR23 MIR2861-201ENST00000636310 90 ntBASIC21.05■□□□□ 0.96
GDF3Q9NR23 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.05■□□□□ 0.96
GDF3Q9NR23 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
GDF3Q9NR23 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GDF3Q9NR23 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.05■□□□□ 0.96
GDF3Q9NR23 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDF3Q9NR23 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
GDF3Q9NR23 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
GDF3Q9NR23 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDF3Q9NR23 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms