Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.06■□□□□ 0.48
HINT3Q9NQE9 AC006015.1-201ENST00000429970 570 ntBASIC18.06■□□□□ 0.48
HINT3Q9NQE9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 SLC7A5P1-201ENST00000568957 537 ntBASIC18.06■□□□□ 0.48
HINT3Q9NQE9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HINT3Q9NQE9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.05■□□□□ 0.48
HINT3Q9NQE9 TREX1-205ENST00000625293 1783 ntBASIC18.04■□□□□ 0.48
HINT3Q9NQE9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.04■□□□□ 0.48
HINT3Q9NQE9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
HINT3Q9NQE9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.03■□□□□ 0.48
HINT3Q9NQE9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HINT3Q9NQE9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms