Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
NEUROD4Q9HD90 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEUROD4Q9HD90 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NEUROD4Q9HD90 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEUROD4Q9HD90 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.89■□□□□ 0.61
NEUROD4Q9HD90 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NEUROD4Q9HD90 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEUROD4Q9HD90 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEUROD4Q9HD90 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.89■□□□□ 0.61
NEUROD4Q9HD90 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.89■□□□□ 0.61
NEUROD4Q9HD90 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.89■□□□□ 0.61
NEUROD4Q9HD90 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NEUROD4Q9HD90 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
NEUROD4Q9HD90 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NEUROD4Q9HD90 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEUROD4Q9HD90 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 AC007322.1-201ENST00000426983 750 ntBASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEUROD4Q9HD90 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 KRT18P68-201ENST00000392293 1000 ntBASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 OR10C1-204ENST00000622521 1039 ntBASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEUROD4Q9HD90 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 AL691432.2-201ENST00000607222 2038 ntBASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 PTBP1P-201ENST00000554374 1601 ntBASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 TMEM179-206ENST00000616017 1645 ntBASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 CYP2T3P-201ENST00000601990 817 ntBASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NEUROD4Q9HD90 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEUROD4Q9HD90 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEUROD4Q9HD90 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEUROD4Q9HD90 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.85■□□□□ 0.61
NEUROD4Q9HD90 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
NEUROD4Q9HD90 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NEUROD4Q9HD90 AC026185.1-201ENST00000445748 174 ntBASIC18.85■□□□□ 0.61
NEUROD4Q9HD90 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.85■□□□□ 0.61
NEUROD4Q9HD90 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEUROD4Q9HD90 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEUROD4Q9HD90 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.85■□□□□ 0.61
NEUROD4Q9HD90 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.85■□□□□ 0.61
NEUROD4Q9HD90 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.85■□□□□ 0.61
NEUROD4Q9HD90 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NEUROD4Q9HD90 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEUROD4Q9HD90 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NEUROD4Q9HD90 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEUROD4Q9HD90 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.84■□□□□ 0.61
NEUROD4Q9HD90 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NEUROD4Q9HD90 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEUROD4Q9HD90 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms