Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 C2orf69P4-201ENST00000565394 541 ntBASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 AC133552.2-202ENST00000575694 574 ntBASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POPDC3Q9HBV1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.69■□□□□ 0.74
POPDC3Q9HBV1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 AC093787.1-201ENST00000450396 207 ntBASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 AP001271.2-201ENST00000624018 1556 ntBASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POPDC3Q9HBV1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
POPDC3Q9HBV1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POPDC3Q9HBV1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
POPDC3Q9HBV1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.67■□□□□ 0.74
POPDC3Q9HBV1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.67■□□□□ 0.74
POPDC3Q9HBV1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
POPDC3Q9HBV1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POPDC3Q9HBV1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POPDC3Q9HBV1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POPDC3Q9HBV1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POPDC3Q9HBV1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
POPDC3Q9HBV1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
POPDC3Q9HBV1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.67■□□□□ 0.74
POPDC3Q9HBV1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POPDC3Q9HBV1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
POPDC3Q9HBV1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.66■□□□□ 0.74
POPDC3Q9HBV1 KRT17P1-201ENST00000399211 1546 ntBASIC19.66■□□□□ 0.74
POPDC3Q9HBV1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
POPDC3Q9HBV1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
POPDC3Q9HBV1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POPDC3Q9HBV1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.66■□□□□ 0.74
POPDC3Q9HBV1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.66■□□□□ 0.74
POPDC3Q9HBV1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POPDC3Q9HBV1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.66■□□□□ 0.74
POPDC3Q9HBV1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POPDC3Q9HBV1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
POPDC3Q9HBV1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
POPDC3Q9HBV1 AC004911.1-201ENST00000416316 871 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms