Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN28AQ9H9Z2 BX323043.1-201ENST00000641006 1765 ntBASIC19.2■□□□□ 0.66
LIN28AQ9H9Z2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN28AQ9H9Z2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.2■□□□□ 0.66
LIN28AQ9H9Z2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.2■□□□□ 0.66
LIN28AQ9H9Z2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.2■□□□□ 0.66
LIN28AQ9H9Z2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.2■□□□□ 0.66
LIN28AQ9H9Z2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN28AQ9H9Z2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.2■□□□□ 0.66
LIN28AQ9H9Z2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LIN28AQ9H9Z2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LIN28AQ9H9Z2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN28AQ9H9Z2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LIN28AQ9H9Z2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.2■□□□□ 0.66
LIN28AQ9H9Z2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LIN28AQ9H9Z2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 TSPY6P-201ENST00000448518 926 ntBASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 AC008694.1-202ENST00000636953 945 ntBASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 AC116562.4-201ENST00000641316 2276 ntBASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
LIN28AQ9H9Z2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 GUSBP6-202ENST00000438529 1198 ntBASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 AC069236.1-201ENST00000604339 616 ntBASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIN28AQ9H9Z2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 AP000974.1-201ENST00000623909 2387 ntBASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 AL138781.1-201ENST00000566567 1274 ntBASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 AC133552.2-202ENST00000575694 574 ntBASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIN28AQ9H9Z2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.16■□□□□ 0.66
LIN28AQ9H9Z2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms