Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 SNORA78-201ENST00000459373 127 ntBASIC21.69■■□□□ 1.06
NXF3Q9H4D5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NXF3Q9H4D5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 RPS2P55-201ENST00000397318 883 ntBASIC21.68■■□□□ 1.06
NXF3Q9H4D5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 AC012618.2-201ENST00000428058 849 ntBASIC21.68■■□□□ 1.06
NXF3Q9H4D5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 AC107956.1-201ENST00000494359 873 ntBASIC21.68■■□□□ 1.06
NXF3Q9H4D5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 AC233702.5-201ENST00000584107 538 ntBASIC21.68■■□□□ 1.06
NXF3Q9H4D5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
NXF3Q9H4D5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NXF3Q9H4D5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NXF3Q9H4D5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.67■■□□□ 1.06
NXF3Q9H4D5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NXF3Q9H4D5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.67■■□□□ 1.06
NXF3Q9H4D5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.67■■□□□ 1.06
NXF3Q9H4D5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.67■■□□□ 1.06
NXF3Q9H4D5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.67■■□□□ 1.06
NXF3Q9H4D5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.67■■□□□ 1.06
NXF3Q9H4D5 MIR4497-201ENST00000583208 89 ntBASIC21.67■■□□□ 1.06
NXF3Q9H4D5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.67■■□□□ 1.06
NXF3Q9H4D5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.67■■□□□ 1.06
NXF3Q9H4D5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.67■■□□□ 1.06
NXF3Q9H4D5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NXF3Q9H4D5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NXF3Q9H4D5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NXF3Q9H4D5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NXF3Q9H4D5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NXF3Q9H4D5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NXF3Q9H4D5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NXF3Q9H4D5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NXF3Q9H4D5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NXF3Q9H4D5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.66■■□□□ 1.06
NXF3Q9H4D5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.66■■□□□ 1.06
NXF3Q9H4D5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.66■■□□□ 1.06
NXF3Q9H4D5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.65■■□□□ 1.06
NXF3Q9H4D5 SMG8-203ENST00000578922 2178 ntBASIC21.65■■□□□ 1.06
NXF3Q9H4D5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NXF3Q9H4D5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
NXF3Q9H4D5 NBPF21P-201ENST00000425093 1451 ntBASIC21.65■■□□□ 1.06
NXF3Q9H4D5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NXF3Q9H4D5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NXF3Q9H4D5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
NXF3Q9H4D5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NXF3Q9H4D5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
NXF3Q9H4D5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.65■■□□□ 1.06
NXF3Q9H4D5 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.65■■□□□ 1.06
NXF3Q9H4D5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.65■■□□□ 1.06
NXF3Q9H4D5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NXF3Q9H4D5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
NXF3Q9H4D5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.65■■□□□ 1.06
NXF3Q9H4D5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NXF3Q9H4D5 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NXF3Q9H4D5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.65■■□□□ 1.06
NXF3Q9H4D5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NXF3Q9H4D5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NXF3Q9H4D5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
NXF3Q9H4D5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
NXF3Q9H4D5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
NXF3Q9H4D5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
NXF3Q9H4D5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
NXF3Q9H4D5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NXF3Q9H4D5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NXF3Q9H4D5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NXF3Q9H4D5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NXF3Q9H4D5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.64■■□□□ 1.05
NXF3Q9H4D5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NXF3Q9H4D5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms