Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 S100PBP-202ENST00000373475 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.754e-6■■■■□ 20.4
CSTF2TQ9H0L4 KCNAB2-218ENST00000493807 560 ntTSL 310.27□□□□□ -0.774e-6■■■■□ 20.4
CSTF2TQ9H0L4 CPT1A-209ENST00000569129 499 ntTSL 410.14□□□□□ -0.794e-6■■■■□ 20.4
CSTF2TQ9H0L4 DENND5A-210ENST00000530044 4060 ntTSL 2 BASIC9.79□□□□□ -0.844e-6■■■■□ 20.4
CSTF2TQ9H0L4 S100PBP-210ENST00000526230 573 ntTSL 49.67□□□□□ -0.864e-6■■■■□ 20.4
CSTF2TQ9H0L4 DEDD-207ENST00000473679 869 ntTSL 39.39□□□□□ -0.914e-6■■■■□ 20.4
CSTF2TQ9H0L4 S100PBP-201ENST00000356689 3583 ntTSL 1 (best)8.71□□□□□ -1.024e-6■■■■□ 20.4
CSTF2TQ9H0L4 NRSN2-AS1-201ENST00000414676 750 ntTSL 28.47□□□□□ -1.054e-6■■■■□ 20.4
CSTF2TQ9H0L4 S100PBP-214ENST00000530710 725 ntTSL 48.26□□□□□ -1.094e-6■■■■□ 20.4
CSTF2TQ9H0L4 RNF8-206ENST00000487950 731 ntTSL 48□□□□□ -1.134e-6■■■■□ 20.4
CSTF2TQ9H0L4 CSGALNACT1-209ENST00000522573 405 ntTSL 57.89□□□□□ -1.154e-6■■■■□ 20.4
CSTF2TQ9H0L4 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.164e-6■■■■□ 20.4
CSTF2TQ9H0L4 BCR-214ENST00000487679 231 ntTSL 1 (best)7.79□□□□□ -1.165e-7■■■■□ 20.4
CSTF2TQ9H0L4 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.24e-6■■■■□ 20.4
CSTF2TQ9H0L4 DEDD-209ENST00000489249 1116 ntTSL 27.43□□□□□ -1.224e-6■■■■□ 20.4
CSTF2TQ9H0L4 S100PBP-216ENST00000531256 551 ntTSL 46.94□□□□□ -1.34e-6■■■■□ 20.4
CSTF2TQ9H0L4 S100PBP-206ENST00000477248 345 ntTSL 35.25□□□□□ -1.574e-6■■■■□ 20.4
CSTF2TQ9H0L4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.114e-7■■■■□ 20.3
CSTF2TQ9H0L4 CDK2AP1-206ENST00000544658 931 ntTSL 2 BASIC8.63□□□□□ -1.034e-7■■■■□ 20.3
CSTF2TQ9H0L4 C22orf34-206ENST00000444628 453 ntTSL 510.37□□□□□ -0.754e-7■■■■□ 20.3
CSTF2TQ9H0L4 GSE1-204ENST00000411612 872 ntTSL 520.39■□□□□ 0.854e-7■■■■□ 20.3
CSTF2TQ9H0L4 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.354e-7■■■■□ 20.3
CSTF2TQ9H0L4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.644e-6■■■■□ 20.3
CSTF2TQ9H0L4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.56■□□□□ 0.564e-6■■■■□ 20.3
CSTF2TQ9H0L4 DLG5-201ENST00000372391 7415 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.624e-6■■■■□ 20.3
CSTF2TQ9H0L4 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.71□□□□□ -0.379e-7■■■■□ 20.3
CSTF2TQ9H0L4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.246e-83■■■■□ 20.3
CSTF2TQ9H0L4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.938e-9■■■■□ 20.3
CSTF2TQ9H0L4 YJEFN3-202ENST00000458210 2785 ntTSL 216.24■□□□□ 0.198e-9■■■■□ 20.3
CSTF2TQ9H0L4 COMT-210ENST00000467943 546 ntTSL 222.68■■□□□ 1.226e-9■■■■□ 20.3
CSTF2TQ9H0L4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.153e-8■■■■□ 20.3
CSTF2TQ9H0L4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.873e-8■■■■□ 20.3
CSTF2TQ9H0L4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.57■□□□□ 0.723e-8■■■■□ 20.3
CSTF2TQ9H0L4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.673e-8■■■■□ 20.3
CSTF2TQ9H0L4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.753e-7■■■■□ 20.3
CSTF2TQ9H0L4 ZNF580-206ENST00000592881 1019 ntTSL 320.08■□□□□ 0.813e-7■■■■□ 20.3
CSTF2TQ9H0L4 RPTOR-204ENST00000572733 424 ntTSL 38.88□□□□□ -0.995e-7■■■■□ 20.3
CSTF2TQ9H0L4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.064e-7■■■■□ 20.3
CSTF2TQ9H0L4 CHID1-205ENST00000454838 3255 ntTSL 5 BASIC11.29□□□□□ -0.64e-7■■■■□ 20.3
CSTF2TQ9H0L4 CHID1-204ENST00000449825 3537 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.614e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.253e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.363e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-214ENST00000548273 818 ntTSL 312.25□□□□□ -0.453e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC11.72□□□□□ -0.533e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-217ENST00000549988 544 ntTSL 311.43□□□□□ -0.583e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC11.33□□□□□ -0.63e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-205ENST00000542344 1675 ntTSL 2 BASIC10.31□□□□□ -0.763e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-210ENST00000547773 1967 ntTSL 5 BASIC10.21□□□□□ -0.783e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-216ENST00000549596 1838 ntTSL 2 BASIC10.17□□□□□ -0.783e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-215ENST00000549479 573 ntTSL 29.96□□□□□ -0.823e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-203ENST00000431879 2031 ntTSL 2 BASIC9.76□□□□□ -0.853e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-213ENST00000548044 1339 ntTSL 5 BASIC9.54□□□□□ -0.883e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-209ENST00000547704 760 ntTSL 59.4□□□□□ -0.93e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-221ENST00000551600 786 ntTSL 59.4□□□□□ -0.93e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-207ENST00000547479 623 ntTSL 59.1□□□□□ -0.953e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-218ENST00000550934 851 ntTSL 57.09□□□□□ -1.273e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-219ENST00000551500 552 ntTSL 1 (best)6.89□□□□□ -1.313e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.333e-7■■■■□ 20.3
CSTF2TQ9H0L4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.44□□□□□ -1.543e-7■■■■□ 20.3
CSTF2TQ9H0L4 AES-203ENST00000585557 491 ntTSL 526.68■■□□□ 1.862e-7■■■■□ 20.3
CSTF2TQ9H0L4 MLLT1-202ENST00000585588 637 ntTSL 315.25■□□□□ 0.033e-7■■■■□ 20.3
CSTF2TQ9H0L4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.221e-6■■■■□ 20.3
CSTF2TQ9H0L4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.67■□□□□ 0.422e-9■■■■□ 20.3
CSTF2TQ9H0L4 TNK2-214ENST00000464041 3545 ntTSL 1 (best)13.41□□□□□ -0.267e-9■■■■□ 20.3
CSTF2TQ9H0L4 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.24□□□□□ -0.457e-9■■■■□ 20.3
CSTF2TQ9H0L4 AATK-202ENST00000374792 4938 ntTSL 218.41■□□□□ 0.546e-7■■■■□ 20.3
CSTF2TQ9H0L4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.156e-7■■■■□ 20.3
CSTF2TQ9H0L4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.181e-6■■■■□ 20.3
CSTF2TQ9H0L4 AC068580.4-203ENST00000636397 4038 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.681e-6■■■■□ 20.3
CSTF2TQ9H0L4 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.441e-6■■■■□ 20.3
CSTF2TQ9H0L4 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.611e-6■■■■□ 20.3
CSTF2TQ9H0L4 ATF6B-216ENST00000494022 320 ntTSL 211.81□□□□□ -0.522e-7■■■■□ 20.3
CSTF2TQ9H0L4 TNXB-202ENST00000442721 372 ntTSL 1 (best)11.31□□□□□ -0.62e-7■■■■□ 20.3
CSTF2TQ9H0L4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.149e-7■■■■□ 20.3
CSTF2TQ9H0L4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.219e-7■■■■□ 20.3
CSTF2TQ9H0L4 NFE2L2-203ENST00000421929 979 ntTSL 1 (best)19.68■□□□□ 0.743e-13■■■■□ 20.3
CSTF2TQ9H0L4 SHANK3-202ENST00000414786 7394 ntTSL 518.44■□□□□ 0.547e-7■■■■□ 20.3
CSTF2TQ9H0L4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.467e-7■■■■□ 20.3
CSTF2TQ9H0L4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.157e-7■■■■□ 20.3
CSTF2TQ9H0L4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.274e-7■■■■□ 20.3
CSTF2TQ9H0L4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.126e-8■■■■□ 20.3
CSTF2TQ9H0L4 CYTH3-208ENST00000482460 557 ntTSL 321.37■■□□□ 1.012e-6■■■■□ 20.3
CSTF2TQ9H0L4 CENPX-203ENST00000577379 861 ntTSL 521.29■■□□□ 16e-8■■■■□ 20.3
CSTF2TQ9H0L4 WIPF2-203ENST00000494757 2113 ntTSL 1 (best)20.23■□□□□ 0.831e-10■■■■□ 20.3
CSTF2TQ9H0L4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.821e-6■■■■□ 20.3
CSTF2TQ9H0L4 SGPL1-204ENST00000486993 537 ntTSL 1 (best)19.4■□□□□ 0.73e-8■■■■□ 20.3
CSTF2TQ9H0L4 CENPX-211ENST00000585091 739 ntTSL 318.84■□□□□ 0.616e-8■■■■□ 20.3
CSTF2TQ9H0L4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.421e-10■■■■□ 20.3
CSTF2TQ9H0L4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.65■□□□□ 0.426e-8■■■■□ 20.3
CSTF2TQ9H0L4 CENPX-209ENST00000584514 882 ntTSL 217.63■□□□□ 0.416e-8■■■■□ 20.3
CSTF2TQ9H0L4 CENPX-207ENST00000583767 894 ntTSL 317.45■□□□□ 0.386e-8■■■■□ 20.3
CSTF2TQ9H0L4 CENPX-205ENST00000580090 752 ntTSL 217.43■□□□□ 0.386e-8■■■■□ 20.3
CSTF2TQ9H0L4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.21■□□□□ 0.352e-6■■■■□ 20.3
CSTF2TQ9H0L4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.12■□□□□ 0.336e-8■■■■□ 20.3
CSTF2TQ9H0L4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.96■□□□□ 0.32e-6■■■■□ 20.3
CSTF2TQ9H0L4 WDR20-209ENST00000556094 785 ntTSL 316.93■□□□□ 0.39e-7■■■■□ 20.3
CSTF2TQ9H0L4 ERCC2-201ENST00000391941 2871 ntTSL 1 (best)16.85■□□□□ 0.292e-6■■■■□ 20.3
CSTF2TQ9H0L4 CENPX-204ENST00000579520 702 ntTSL 315.96■□□□□ 0.156e-8■■■■□ 20.3
CSTF2TQ9H0L4 TPRN-201ENST00000333046 2109 ntAPPRIS ALT2 TSL 215.92■□□□□ 0.141e-6■■■■□ 20.3
CSTF2TQ9H0L4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11e-10■■■■□ 20.3
Retrieved 100 of 19,151 protein–RNA pairs in 130.9 ms