RNA–Protein interactions for RNA: ENST00000487950.1

RNF8-206, Transcript of ring finger protein 8, humanhuman

TSL 4

Gene RNF8, Length 731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-206ENST00000487950 AEBP2Q6ZN18 517 aaPredicted RBP24.42■■□□□ 1.5
RNF8-206ENST00000487950 CHIC1Q5VXU3 224 aa24.01■■□□□ 1.43
RNF8-206ENST00000487950 PHF23Q9BUL5 403 aaPredicted RBP21.19■□□□□ 0.98
RNF8-206ENST00000487950 SENP3Q9H4L4 574 aaPredicted RBP20.91■□□□□ 0.94
RNF8-206ENST00000487950 PLPPR3Q6T4P5 718 aa19.56■□□□□ 0.72
RNF8-206ENST00000487950 FOXD1Q16676 465 aa19.45■□□□□ 0.7
RNF8-206ENST00000487950 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
RNF8-206ENST00000487950 ADRA2BP18089 450 aa18.56■□□□□ 0.56
RNF8-206ENST00000487950 MSH5O43196 834 aa18.27■□□□□ 0.52
RNF8-206ENST00000487950 PIAS4Q8N2W9 510 aaPredicted RBP18.23■□□□□ 0.51
RNF8-206ENST00000487950 POTEDQ86YR6 584 aa17.82■□□□□ 0.44
RNF8-206ENST00000487950 KCNA4P22459 653 aa17.46■□□□□ 0.39
RNF8-206ENST00000487950 PPP4R3CPQ6ZMV5 832 aa17.28■□□□□ 0.36
RNF8-206ENST00000487950 EHMT2Q96KQ7 1210 aa17.03■□□□□ 0.32
RNF8-206ENST00000487950 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
RNF8-206ENST00000487950 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
RNF8-206ENST00000487950 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
RNF8-206ENST00000487950 CNKSR2Q8WXI2 1034 aa16.74■□□□□ 0.27
RNF8-206ENST00000487950 NPM3O75607 178 aaKnown RBP16.66■□□□□ 0.26
RNF8-206ENST00000487950 SLC4A1APQ9BWU0 796 aaKnown RBP16.65■□□□□ 0.26
RNF8-206ENST00000487950 DMRT2Q9Y5R5 561 aa16.55■□□□□ 0.24
RNF8-206ENST00000487950 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
RNF8-206ENST00000487950 RNF216Q9NWF9 866 aaPredicted RBP16.36■□□□□ 0.21
RNF8-206ENST00000487950 HOXD11P31277 338 aaPredicted RBP16.27■□□□□ 0.2
RNF8-206ENST00000487950 DNAJC5BQ9UF47 199 aa16.21■□□□□ 0.19
RNF8-206ENST00000487950 ZBTB22O15209 634 aa16.15■□□□□ 0.18
RNF8-206ENST00000487950 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
RNF8-206ENST00000487950 FOXD4L1Q9NU39 408 aa15.74■□□□□ 0.11
RNF8-206ENST00000487950 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
RNF8-206ENST00000487950 CACNB1Q02641 598 aaPredicted RBP15.71■□□□□ 0.11
RNF8-206ENST00000487950 RNF39Q9H2S5 420 aa15.53■□□□□ 0.08
RNF8-206ENST00000487950 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.42■□□□□ 0.068e-7■■■■□ 25.2
RNF8-206ENST00000487950 MYCNP04198 464 aaPredicted RBP15.36■□□□□ 0.05
RNF8-206ENST00000487950 C1QBPQ07021 282 aaKnown RBP15.34■□□□□ 0.05
RNF8-206ENST00000487950 U3KPZ7 1027 aaPredicted RBP15.26■□□□□ 0.03
RNF8-206ENST00000487950 ATXN8OSP0DMR3 200 aa15.15■□□□□ 0.02
RNF8-206ENST00000487950 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.07■□□□□ 0
RNF8-206ENST00000487950 HNRNPUL2Q1KMD3 747 aaKnown RBP15.07■□□□□ 0
RNF8-206ENST00000487950 SAMD1Q6SPF0 538 aaPredicted RBP15.05■□□□□ -0
RNF8-206ENST00000487950 ATF5Q9Y2D1 282 aaPredicted RBP15□□□□□ -0.01
RNF8-206ENST00000487950 APLP2Q06481 763 aa14.84□□□□□ -0.03
RNF8-206ENST00000487950 FKBP8Q14318 412 aa14.84□□□□□ -0.03
RNF8-206ENST00000487950 SPINK5Q9NQ38 1064 aaPredicted RBP14.76□□□□□ -0.05
RNF8-206ENST00000487950 CAPN15O75808 1086 aa14.7□□□□□ -0.06
RNF8-206ENST00000487950 ZNF219Q9P2Y4 722 aaPredicted RBP14.69□□□□□ -0.06
RNF8-206ENST00000487950 RTN4Q9NQC3 1192 aaKnown RBP14.63□□□□□ -0.07
RNF8-206ENST00000487950 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
RNF8-206ENST00000487950 DSG3P32926 999 aa14.55□□□□□ -0.08
RNF8-206ENST00000487950 POLA2Q14181 598 aa14.47□□□□□ -0.09
RNF8-206ENST00000487950 AMER1Q5JTC6 1135 aaPredicted RBP14.4□□□□□ -0.1
RNF8-206ENST00000487950 ABCB7O75027 752 aa14.39□□□□□ -0.11
RNF8-206ENST00000487950 MKRN4PQ13434 485 aaPredicted RBP14.35□□□□□ -0.11
RNF8-206ENST00000487950 FBLN2P98095 1184 aa14.24□□□□□ -0.13
RNF8-206ENST00000487950 ZBTB12Q9Y330 459 aaPredicted RBP14.2□□□□□ -0.14
RNF8-206ENST00000487950 SPDYE4A6NLX3 237 aa14.19□□□□□ -0.14
RNF8-206ENST00000487950 SLC24A1O60721 1099 aa14.06□□□□□ -0.16
RNF8-206ENST00000487950 POTEHQ6S545 545 aa13.99□□□□□ -0.17
RNF8-206ENST00000487950 PROM2Q8N271 834 aa13.96□□□□□ -0.17
RNF8-206ENST00000487950 OSCARQ8IYS5 282 aa13.95□□□□□ -0.18
RNF8-206ENST00000487950 RBM42Q9BTD8 480 aaKnown RBP13.94□□□□□ -0.18
RNF8-206ENST00000487950 FBXO3Q9UK99 471 aa13.92□□□□□ -0.18
RNF8-206ENST00000487950 SPDYE2BA6NHP3 402 aa13.88□□□□□ -0.19
RNF8-206ENST00000487950 SPDYE6P0CI01 402 aa13.88□□□□□ -0.19
RNF8-206ENST00000487950 SPDYE2Q495Y8 402 aa13.88□□□□□ -0.19
RNF8-206ENST00000487950 VASPP50552 380 aaPredicted RBP13.87□□□□□ -0.19
RNF8-206ENST00000487950 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
RNF8-206ENST00000487950 SSUH2Q9Y2M2 353 aa13.83□□□□□ -0.2
RNF8-206ENST00000487950 IFNLR1Q8IU57 520 aaPredicted RBP13.8□□□□□ -0.2
RNF8-206ENST00000487950 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
RNF8-206ENST00000487950 CHRDL2Q6WN34 429 aa13.61□□□□□ -0.23
RNF8-206ENST00000487950 AKT1S1Q96B36 256 aa13.6□□□□□ -0.23
RNF8-206ENST00000487950 PKD2Q13563 968 aa13.57□□□□□ -0.24
RNF8-206ENST00000487950 DCAF8L2P0C7V8 631 aa13.56□□□□□ -0.24
RNF8-206ENST00000487950 KLHL34Q8N239 644 aa13.52□□□□□ -0.25
RNF8-206ENST00000487950 STAG3Q9UJ98 1225 aa13.5□□□□□ -0.25
RNF8-206ENST00000487950 REM2Q8IYK8 340 aaPredicted RBP13.45□□□□□ -0.26
RNF8-206ENST00000487950 PLCD3Q8N3E9 789 aa13.43□□□□□ -0.26
RNF8-206ENST00000487950 SPOCK2Q92563 424 aa13.43□□□□□ -0.26
RNF8-206ENST00000487950 MIER1Q8N108 512 aa13.41□□□□□ -0.26
RNF8-206ENST00000487950 PLCB2Q00722 1185 aa13.39□□□□□ -0.27
RNF8-206ENST00000487950 SPDYE1Q8NFV5 336 aaPredicted RBP13.39□□□□□ -0.27
RNF8-206ENST00000487950 ECM2O94769 699 aaPredicted RBP13.33□□□□□ -0.28
RNF8-206ENST00000487950 PITPNM1O00562 1244 aa13.3□□□□□ -0.28
RNF8-206ENST00000487950 CLEC11AQ9Y240 323 aa13.3□□□□□ -0.28
RNF8-206ENST00000487950 HAP1P54257 671 aaPredicted RBP13.29□□□□□ -0.28
RNF8-206ENST00000487950 NPM1P06748 294 aaKnown RBP eCLIP13.27□□□□□ -0.29
RNF8-206ENST00000487950 PIP4P2Q8N4L2 257 aa13.27□□□□□ -0.29
RNF8-206ENST00000487950 RGL2O15211 777 aa13.26□□□□□ -0.29
RNF8-206ENST00000487950 PRR29P0C7W0 189 aa13.23□□□□□ -0.29
RNF8-206ENST00000487950 CIZ1Q9ULV3 898 aaPredicted RBP13.22□□□□□ -0.29
RNF8-206ENST00000487950 FXR2P51116 673 aaKnown RBP eCLIP13.18□□□□□ -0.3
RNF8-206ENST00000487950 CREBZFQ9NS37 354 aa13.18□□□□□ -0.3
RNF8-206ENST00000487950 PLEKHG5O94827 1062 aa13.16□□□□□ -0.3
RNF8-206ENST00000487950 ZBTB47Q9UFB7 747 aaPredicted RBP13.13□□□□□ -0.31
RNF8-206ENST00000487950 MNX1P50219 401 aaPredicted RBP13.11□□□□□ -0.31
RNF8-206ENST00000487950 HAX1O00165 279 aa13.1□□□□□ -0.31
RNF8-206ENST00000487950 PAXIP1Q6ZW49 1069 aaPredicted RBP13.1□□□□□ -0.31
RNF8-206ENST00000487950 SP7Q8TDD2 431 aaPredicted RBP13.1□□□□□ -0.31
RNF8-206ENST00000487950 CFAP44Q96MT7 982 aa13.09□□□□□ -0.31
RNF8-206ENST00000487950 BBXQ8WY36 941 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms