Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
KRTAP4-1Q9BYQ7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 AC244015.2-201ENST00000616358 1861 ntBASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 AC011506.1-201ENST00000474329 610 ntBASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
KRTAP4-1Q9BYQ7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 KRT16P1-201ENST00000399124 1418 ntBASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 ECEL1P2-202ENST00000465689 757 ntBASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
KRTAP4-1Q9BYQ7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
KRTAP4-1Q9BYQ7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms