Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.9■□□□□ 0.3
SEC22CQ9BRL7 LINC01465-201ENST00000408887 1940 ntBASIC16.9■□□□□ 0.3
SEC22CQ9BRL7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC22CQ9BRL7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.89■□□□□ 0.3
SEC22CQ9BRL7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 AC104581.1-202ENST00000635932 2618 ntBASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEC22CQ9BRL7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.88■□□□□ 0.29
SEC22CQ9BRL7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 NOC2LP1-202ENST00000452600 2235 ntBASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 ABHD17AP5-201ENST00000580133 923 ntBASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 AL032819.2-201ENST00000624543 2162 ntBASIC16.87■□□□□ 0.29
SEC22CQ9BRL7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 PCDHB18P-201ENST00000524813 2368 ntBASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.86■□□□□ 0.29
SEC22CQ9BRL7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC22CQ9BRL7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms