Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
EYA3Q99504 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
EYA3Q99504 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
EYA3Q99504 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
EYA3Q99504 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.42■■□□□ 1.5
EYA3Q99504 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC24.42■■□□□ 1.5
EYA3Q99504 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
EYA3Q99504 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
EYA3Q99504 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
EYA3Q99504 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC24.42■■□□□ 1.5
EYA3Q99504 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
EYA3Q99504 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
EYA3Q99504 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
EYA3Q99504 KRT18P35-201ENST00000510488 1269 ntBASIC24.42■■□□□ 1.5
EYA3Q99504 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC24.42■■□□□ 1.5
EYA3Q99504 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
EYA3Q99504 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC24.42■■□□□ 1.5
EYA3Q99504 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
EYA3Q99504 AL049597.2-201ENST00000565575 961 ntBASIC24.42■■□□□ 1.5
EYA3Q99504 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC24.42■■□□□ 1.5
EYA3Q99504 AL590326.2-201ENST00000625139 305 ntBASIC24.42■■□□□ 1.5
EYA3Q99504 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
EYA3Q99504 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
EYA3Q99504 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.42■■□□□ 1.5
EYA3Q99504 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
EYA3Q99504 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC24.42■■□□□ 1.5
EYA3Q99504 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
EYA3Q99504 AL049796.1-201ENST00000565336 1766 ntBASIC24.42■■□□□ 1.5
EYA3Q99504 LINC01568-207ENST00000641790 1380 ntBASIC24.42■■□□□ 1.5
EYA3Q99504 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
EYA3Q99504 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
EYA3Q99504 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC24.41■■□□□ 1.5
EYA3Q99504 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
EYA3Q99504 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
EYA3Q99504 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
EYA3Q99504 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
EYA3Q99504 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC24.41■■□□□ 1.5
EYA3Q99504 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC24.41■■□□□ 1.5
EYA3Q99504 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC24.41■■□□□ 1.5
EYA3Q99504 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC24.41■■□□□ 1.5
EYA3Q99504 NAPSB-206ENST00000562112 1266 ntBASIC24.41■■□□□ 1.5
EYA3Q99504 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC24.41■■□□□ 1.5
EYA3Q99504 KRT16P1-201ENST00000399124 1418 ntBASIC24.41■■□□□ 1.5
EYA3Q99504 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC24.41■■□□□ 1.5
EYA3Q99504 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.41■■□□□ 1.5
EYA3Q99504 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.41■■□□□ 1.5
EYA3Q99504 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
EYA3Q99504 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
EYA3Q99504 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.4■■□□□ 1.5
EYA3Q99504 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
EYA3Q99504 ARMC10P1-201ENST00000313754 855 ntBASIC24.4■■□□□ 1.5
EYA3Q99504 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
EYA3Q99504 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC24.4■■□□□ 1.5
EYA3Q99504 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC24.4■■□□□ 1.5
EYA3Q99504 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.4■■□□□ 1.5
EYA3Q99504 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
EYA3Q99504 FITM1-202ENST00000559294 800 ntBASIC24.4■■□□□ 1.5
EYA3Q99504 NT5C-211ENST00000582170 653 ntTSL 3 BASIC24.4■■□□□ 1.5
EYA3Q99504 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC24.4■■□□□ 1.5
EYA3Q99504 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
EYA3Q99504 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
EYA3Q99504 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
EYA3Q99504 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
EYA3Q99504 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
EYA3Q99504 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
EYA3Q99504 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.39■■□□□ 1.5
EYA3Q99504 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
EYA3Q99504 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.39■■□□□ 1.5
EYA3Q99504 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
EYA3Q99504 CALM3-202ENST00000391918 702 ntTSL 2 BASIC24.39■■□□□ 1.49
EYA3Q99504 AC005521.1-201ENST00000393351 872 ntBASIC24.39■■□□□ 1.49
EYA3Q99504 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC24.39■■□□□ 1.49
EYA3Q99504 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC24.39■■□□□ 1.49
EYA3Q99504 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC24.39■■□□□ 1.49
EYA3Q99504 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
EYA3Q99504 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
EYA3Q99504 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
EYA3Q99504 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
EYA3Q99504 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
EYA3Q99504 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
EYA3Q99504 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.38■■□□□ 1.49
EYA3Q99504 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.38■■□□□ 1.49
EYA3Q99504 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.38■■□□□ 1.49
EYA3Q99504 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
EYA3Q99504 AC113347.1-201ENST00000413321 391 ntBASIC24.38■■□□□ 1.49
EYA3Q99504 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC24.38■■□□□ 1.49
EYA3Q99504 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC24.38■■□□□ 1.49
EYA3Q99504 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC24.38■■□□□ 1.49
EYA3Q99504 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC24.38■■□□□ 1.49
EYA3Q99504 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC24.38■■□□□ 1.49
EYA3Q99504 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC24.38■■□□□ 1.49
EYA3Q99504 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC24.38■■□□□ 1.49
EYA3Q99504 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.38■■□□□ 1.49
EYA3Q99504 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC24.38■■□□□ 1.49
EYA3Q99504 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
EYA3Q99504 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
EYA3Q99504 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
EYA3Q99504 KRT18P22-201ENST00000402024 1347 ntBASIC24.37■■□□□ 1.49
EYA3Q99504 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
EYA3Q99504 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms