Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.27■□□□□ 0.84
PHOX2BQ99453 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PHOX2BQ99453 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.27■□□□□ 0.84
PHOX2BQ99453 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PHOX2BQ99453 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.27■□□□□ 0.84
PHOX2BQ99453 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.27■□□□□ 0.84
PHOX2BQ99453 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.27■□□□□ 0.84
PHOX2BQ99453 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PHOX2BQ99453 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.27■□□□□ 0.83
PHOX2BQ99453 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.27■□□□□ 0.83
PHOX2BQ99453 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PHOX2BQ99453 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PHOX2BQ99453 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHOX2BQ99453 NBPF21P-201ENST00000425093 1451 ntBASIC20.26■□□□□ 0.83
PHOX2BQ99453 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PHOX2BQ99453 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHOX2BQ99453 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.26■□□□□ 0.83
PHOX2BQ99453 AL390719.1-204ENST00000412397 1219 ntBASIC20.26■□□□□ 0.83
PHOX2BQ99453 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.26■□□□□ 0.83
PHOX2BQ99453 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.26■□□□□ 0.83
PHOX2BQ99453 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PHOX2BQ99453 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHOX2BQ99453 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.26■□□□□ 0.83
PHOX2BQ99453 AC139887.4-201ENST00000607877 719 ntBASIC20.26■□□□□ 0.83
PHOX2BQ99453 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PHOX2BQ99453 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.26■□□□□ 0.83
PHOX2BQ99453 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHOX2BQ99453 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHOX2BQ99453 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PHOX2BQ99453 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PHOX2BQ99453 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHOX2BQ99453 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHOX2BQ99453 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHOX2BQ99453 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PHOX2BQ99453 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHOX2BQ99453 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.25■□□□□ 0.83
PHOX2BQ99453 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PHOX2BQ99453 AP002982.1-201ENST00000492365 877 ntBASIC20.25■□□□□ 0.83
PHOX2BQ99453 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHOX2BQ99453 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.25■□□□□ 0.83
PHOX2BQ99453 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PHOX2BQ99453 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.25■□□□□ 0.83
PHOX2BQ99453 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.25■□□□□ 0.83
PHOX2BQ99453 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.25■□□□□ 0.83
PHOX2BQ99453 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.25■□□□□ 0.83
PHOX2BQ99453 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHOX2BQ99453 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHOX2BQ99453 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.25■□□□□ 0.83
PHOX2BQ99453 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
PHOX2BQ99453 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHOX2BQ99453 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PHOX2BQ99453 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PHOX2BQ99453 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PHOX2BQ99453 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PHOX2BQ99453 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PHOX2BQ99453 AC007375.3-201ENST00000600936 2314 ntBASIC20.24■□□□□ 0.83
PHOX2BQ99453 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.24■□□□□ 0.83
PHOX2BQ99453 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.24■□□□□ 0.83
PHOX2BQ99453 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PHOX2BQ99453 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PHOX2BQ99453 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PHOX2BQ99453 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.24■□□□□ 0.83
PHOX2BQ99453 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PHOX2BQ99453 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PHOX2BQ99453 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.24■□□□□ 0.83
PHOX2BQ99453 CR392000.1-201ENST00000624770 1228 ntBASIC20.24■□□□□ 0.83
PHOX2BQ99453 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PHOX2BQ99453 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PHOX2BQ99453 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PHOX2BQ99453 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PHOX2BQ99453 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHOX2BQ99453 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHOX2BQ99453 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHOX2BQ99453 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHOX2BQ99453 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 INGX-201ENST00000359239 846 ntBASIC20.23■□□□□ 0.83
PHOX2BQ99453 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHOX2BQ99453 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PHOX2BQ99453 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PHOX2BQ99453 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PHOX2BQ99453 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PHOX2BQ99453 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PHOX2BQ99453 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.23■□□□□ 0.83
PHOX2BQ99453 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms