Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.82■□□□□ 0.92
CDK5RAP1Q96SZ6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 AC239809.2-201ENST00000415381 517 ntBASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 AC133681.1-201ENST00000465482 601 ntBASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP1Q96SZ6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDK5RAP1Q96SZ6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CDK5RAP1Q96SZ6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CDK5RAP1Q96SZ6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CDK5RAP1Q96SZ6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDK5RAP1Q96SZ6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDK5RAP1Q96SZ6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.79■□□□□ 0.92
CDK5RAP1Q96SZ6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDK5RAP1Q96SZ6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CDK5RAP1Q96SZ6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDK5RAP1Q96SZ6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.79■□□□□ 0.92
CDK5RAP1Q96SZ6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CDK5RAP1Q96SZ6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDK5RAP1Q96SZ6 AC066615.1-201ENST00000640911 628 ntBASIC20.79■□□□□ 0.92
CDK5RAP1Q96SZ6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDK5RAP1Q96SZ6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDK5RAP1Q96SZ6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDK5RAP1Q96SZ6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDK5RAP1Q96SZ6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDK5RAP1Q96SZ6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 AC124016.1-201ENST00000609552 612 ntBASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 AL023875.1-201ENST00000640777 796 ntBASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.77■□□□□ 0.92
CDK5RAP1Q96SZ6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDK5RAP1Q96SZ6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CDK5RAP1Q96SZ6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDK5RAP1Q96SZ6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDK5RAP1Q96SZ6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms