Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.76■□□□□ 0.75
CFAP54Q96N23 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.76■□□□□ 0.75
CFAP54Q96N23 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.76■□□□□ 0.75
CFAP54Q96N23 AC139530.1-201ENST00000575312 1977 ntBASIC19.76■□□□□ 0.75
CFAP54Q96N23 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CFAP54Q96N23 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CFAP54Q96N23 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CFAP54Q96N23 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CFAP54Q96N23 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CFAP54Q96N23 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.75■□□□□ 0.75
CFAP54Q96N23 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.75■□□□□ 0.75
CFAP54Q96N23 AC026271.3-201ENST00000571884 352 ntBASIC19.75■□□□□ 0.75
CFAP54Q96N23 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.75■□□□□ 0.75
CFAP54Q96N23 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CFAP54Q96N23 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CFAP54Q96N23 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CFAP54Q96N23 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CFAP54Q96N23 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CFAP54Q96N23 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CFAP54Q96N23 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CFAP54Q96N23 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.75■□□□□ 0.75
CFAP54Q96N23 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.75■□□□□ 0.75
CFAP54Q96N23 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CFAP54Q96N23 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CFAP54Q96N23 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.75■□□□□ 0.75
CFAP54Q96N23 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CFAP54Q96N23 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CFAP54Q96N23 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.74■□□□□ 0.75
CFAP54Q96N23 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.74■□□□□ 0.75
CFAP54Q96N23 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.74■□□□□ 0.75
CFAP54Q96N23 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CFAP54Q96N23 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CFAP54Q96N23 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CFAP54Q96N23 NIFKP9-201ENST00000419265 221 ntBASIC19.73■□□□□ 0.75
CFAP54Q96N23 KSR1P1-201ENST00000446298 240 ntBASIC19.73■□□□□ 0.75
CFAP54Q96N23 AC245052.3-201ENST00000450182 901 ntBASIC19.73■□□□□ 0.75
CFAP54Q96N23 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.73■□□□□ 0.75
CFAP54Q96N23 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.73■□□□□ 0.75
CFAP54Q96N23 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CFAP54Q96N23 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CFAP54Q96N23 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CFAP54Q96N23 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CFAP54Q96N23 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CFAP54Q96N23 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CFAP54Q96N23 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.73■□□□□ 0.75
CFAP54Q96N23 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CFAP54Q96N23 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.73■□□□□ 0.75
CFAP54Q96N23 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CFAP54Q96N23 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CFAP54Q96N23 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.73■□□□□ 0.75
CFAP54Q96N23 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.73■□□□□ 0.75
CFAP54Q96N23 AL121829.2-201ENST00000620908 328 ntBASIC19.73■□□□□ 0.75
CFAP54Q96N23 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CFAP54Q96N23 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CFAP54Q96N23 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CFAP54Q96N23 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CFAP54Q96N23 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CFAP54Q96N23 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CFAP54Q96N23 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CFAP54Q96N23 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.72■□□□□ 0.75
CFAP54Q96N23 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.72■□□□□ 0.75
CFAP54Q96N23 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.72■□□□□ 0.75
CFAP54Q96N23 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.72■□□□□ 0.75
CFAP54Q96N23 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.72■□□□□ 0.75
CFAP54Q96N23 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.72■□□□□ 0.75
CFAP54Q96N23 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CFAP54Q96N23 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CFAP54Q96N23 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CFAP54Q96N23 AP002982.1-201ENST00000492365 877 ntBASIC19.71■□□□□ 0.75
CFAP54Q96N23 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.71■□□□□ 0.75
CFAP54Q96N23 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.71■□□□□ 0.75
CFAP54Q96N23 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.71■□□□□ 0.75
CFAP54Q96N23 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.71■□□□□ 0.75
CFAP54Q96N23 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CFAP54Q96N23 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.71■□□□□ 0.75
CFAP54Q96N23 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CFAP54Q96N23 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CFAP54Q96N23 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.71■□□□□ 0.75
CFAP54Q96N23 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.71■□□□□ 0.75
CFAP54Q96N23 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms