Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPG11Q96JI7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.05■□□□□ 0.32
SPG11Q96JI7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SPG11Q96JI7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPG11Q96JI7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPG11Q96JI7 NAPSB-206ENST00000562112 1266 ntBASIC17.05■□□□□ 0.32
SPG11Q96JI7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SPG11Q96JI7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPG11Q96JI7 KRT16P1-201ENST00000399124 1418 ntBASIC17.05■□□□□ 0.32
SPG11Q96JI7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.05■□□□□ 0.32
SPG11Q96JI7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPG11Q96JI7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.05■□□□□ 0.32
SPG11Q96JI7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPG11Q96JI7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPG11Q96JI7 ECEL1P2-202ENST00000465689 757 ntBASIC17.05■□□□□ 0.32
SPG11Q96JI7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPG11Q96JI7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPG11Q96JI7 FAM87A-204ENST00000613235 858 ntBASIC17.05■□□□□ 0.32
SPG11Q96JI7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.04■□□□□ 0.32
SPG11Q96JI7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPG11Q96JI7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.04■□□□□ 0.32
SPG11Q96JI7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPG11Q96JI7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPG11Q96JI7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPG11Q96JI7 BX664615.1-201ENST00000443558 458 ntBASIC17.04■□□□□ 0.32
SPG11Q96JI7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.04■□□□□ 0.32
SPG11Q96JI7 AC022616.7-201ENST00000525383 220 ntBASIC17.04■□□□□ 0.32
SPG11Q96JI7 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.04■□□□□ 0.32
SPG11Q96JI7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.04■□□□□ 0.32
SPG11Q96JI7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPG11Q96JI7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPG11Q96JI7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
SPG11Q96JI7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.04■□□□□ 0.32
SPG11Q96JI7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPG11Q96JI7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SPG11Q96JI7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPG11Q96JI7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.04■□□□□ 0.32
SPG11Q96JI7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.04■□□□□ 0.32
SPG11Q96JI7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.04■□□□□ 0.32
SPG11Q96JI7 FAM8A6P-201ENST00000407496 1135 ntBASIC17.04■□□□□ 0.32
SPG11Q96JI7 ATP5G1P1-201ENST00000448724 379 ntBASIC17.04■□□□□ 0.32
SPG11Q96JI7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPG11Q96JI7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPG11Q96JI7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPG11Q96JI7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SPG11Q96JI7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPG11Q96JI7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPG11Q96JI7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPG11Q96JI7 AC011506.1-201ENST00000474329 610 ntBASIC17.03■□□□□ 0.32
SPG11Q96JI7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SPG11Q96JI7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.03■□□□□ 0.32
SPG11Q96JI7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SPG11Q96JI7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPG11Q96JI7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPG11Q96JI7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SPG11Q96JI7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SPG11Q96JI7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SPG11Q96JI7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SPG11Q96JI7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SPG11Q96JI7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SPG11Q96JI7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SPG11Q96JI7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.02■□□□□ 0.32
SPG11Q96JI7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SPG11Q96JI7 CR392000.1-201ENST00000624770 1228 ntBASIC17.02■□□□□ 0.32
SPG11Q96JI7 AP000550.4-202ENST00000639755 178 ntBASIC17.02■□□□□ 0.32
SPG11Q96JI7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.02■□□□□ 0.32
SPG11Q96JI7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SPG11Q96JI7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPG11Q96JI7 AC127496.7-201ENST00000625110 1798 ntBASIC17.02■□□□□ 0.32
SPG11Q96JI7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPG11Q96JI7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPG11Q96JI7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SPG11Q96JI7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.02■□□□□ 0.32
SPG11Q96JI7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPG11Q96JI7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SPG11Q96JI7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.02■□□□□ 0.31
SPG11Q96JI7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SPG11Q96JI7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.02■□□□□ 0.31
SPG11Q96JI7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SPG11Q96JI7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SPG11Q96JI7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
SPG11Q96JI7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.02■□□□□ 0.31
SPG11Q96JI7 AC011484.1-201ENST00000377652 1995 ntBASIC17.02■□□□□ 0.31
SPG11Q96JI7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPG11Q96JI7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPG11Q96JI7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.01■□□□□ 0.31
SPG11Q96JI7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.01■□□□□ 0.31
SPG11Q96JI7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.01■□□□□ 0.31
SPG11Q96JI7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.01■□□□□ 0.31
SPG11Q96JI7 AP005242.2-201ENST00000580065 1175 ntBASIC17.01■□□□□ 0.31
SPG11Q96JI7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPG11Q96JI7 RNF152P1-201ENST00000397754 604 ntBASIC17.01■□□□□ 0.31
SPG11Q96JI7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.01■□□□□ 0.31
SPG11Q96JI7 LIN28AP1-201ENST00000429574 405 ntBASIC17.01■□□□□ 0.31
SPG11Q96JI7 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.01■□□□□ 0.31
SPG11Q96JI7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.01■□□□□ 0.31
SPG11Q96JI7 AC023632.3-201ENST00000521633 145 ntBASIC17.01■□□□□ 0.31
SPG11Q96JI7 LINC01238-205ENST00000567549 1107 ntBASIC17.01■□□□□ 0.31
SPG11Q96JI7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPG11Q96JI7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms