Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDCA5Q96FF9 COPE-203ENST00000351079 907 ntTSL 2 BASIC23.6■■□□□ 1.37
CDCA5Q96FF9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDCA5Q96FF9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC23.6■■□□□ 1.37
CDCA5Q96FF9 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDCA5Q96FF9 AC011506.1-201ENST00000474329 610 ntBASIC23.6■■□□□ 1.37
CDCA5Q96FF9 LINC01238-205ENST00000567549 1107 ntBASIC23.6■■□□□ 1.37
CDCA5Q96FF9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CDCA5Q96FF9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDCA5Q96FF9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDCA5Q96FF9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDCA5Q96FF9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDCA5Q96FF9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.59■■□□□ 1.37
CDCA5Q96FF9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
CDCA5Q96FF9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDCA5Q96FF9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDCA5Q96FF9 CRYGFP-201ENST00000418459 633 ntBASIC23.59■■□□□ 1.37
CDCA5Q96FF9 AC117947.1-201ENST00000427448 529 ntBASIC23.59■■□□□ 1.37
CDCA5Q96FF9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDCA5Q96FF9 AC128688.1-201ENST00000487626 519 ntBASIC23.59■■□□□ 1.37
CDCA5Q96FF9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC23.59■■□□□ 1.37
CDCA5Q96FF9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CDCA5Q96FF9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.59■■□□□ 1.37
CDCA5Q96FF9 MYC-208ENST00000641036 567 ntBASIC23.59■■□□□ 1.37
CDCA5Q96FF9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDCA5Q96FF9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDCA5Q96FF9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDCA5Q96FF9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
CDCA5Q96FF9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.58■■□□□ 1.37
CDCA5Q96FF9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.58■■□□□ 1.37
CDCA5Q96FF9 AC097488.1-201ENST00000507834 756 ntBASIC23.58■■□□□ 1.37
CDCA5Q96FF9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDCA5Q96FF9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC23.58■■□□□ 1.37
CDCA5Q96FF9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.58■■□□□ 1.37
CDCA5Q96FF9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
CDCA5Q96FF9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDCA5Q96FF9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
CDCA5Q96FF9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CDCA5Q96FF9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.57■■□□□ 1.36
CDCA5Q96FF9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
CDCA5Q96FF9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.57■■□□□ 1.36
CDCA5Q96FF9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CDCA5Q96FF9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDCA5Q96FF9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CDCA5Q96FF9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDCA5Q96FF9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CDCA5Q96FF9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.57■■□□□ 1.36
CDCA5Q96FF9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC23.57■■□□□ 1.36
CDCA5Q96FF9 KRT18P56-201ENST00000507275 550 ntBASIC23.57■■□□□ 1.36
CDCA5Q96FF9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC23.57■■□□□ 1.36
CDCA5Q96FF9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC23.57■■□□□ 1.36
CDCA5Q96FF9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDCA5Q96FF9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDCA5Q96FF9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDCA5Q96FF9 AC242852.2-201ENST00000615738 1807 ntBASIC23.56■■□□□ 1.36
CDCA5Q96FF9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC23.56■■□□□ 1.36
CDCA5Q96FF9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDCA5Q96FF9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDCA5Q96FF9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDCA5Q96FF9 AL031133.1-201ENST00000406807 723 ntBASIC23.56■■□□□ 1.36
CDCA5Q96FF9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC23.56■■□□□ 1.36
CDCA5Q96FF9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23.56■■□□□ 1.36
CDCA5Q96FF9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.56■■□□□ 1.36
CDCA5Q96FF9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.56■■□□□ 1.36
CDCA5Q96FF9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDCA5Q96FF9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC23.56■■□□□ 1.36
CDCA5Q96FF9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CDCA5Q96FF9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDCA5Q96FF9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDCA5Q96FF9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDCA5Q96FF9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDCA5Q96FF9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDCA5Q96FF9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDCA5Q96FF9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.55■■□□□ 1.36
CDCA5Q96FF9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
CDCA5Q96FF9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC23.55■■□□□ 1.36
CDCA5Q96FF9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDCA5Q96FF9 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDCA5Q96FF9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDCA5Q96FF9 FAM8A6P-201ENST00000407496 1135 ntBASIC23.55■■□□□ 1.36
CDCA5Q96FF9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDCA5Q96FF9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CDCA5Q96FF9 AC091390.4-202ENST00000476426 537 ntBASIC23.55■■□□□ 1.36
CDCA5Q96FF9 KRT126P-201ENST00000549467 1181 ntBASIC23.55■■□□□ 1.36
CDCA5Q96FF9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDCA5Q96FF9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDCA5Q96FF9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDCA5Q96FF9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CDCA5Q96FF9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.54■■□□□ 1.36
CDCA5Q96FF9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDCA5Q96FF9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDCA5Q96FF9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDCA5Q96FF9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDCA5Q96FF9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDCA5Q96FF9 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.54■■□□□ 1.36
CDCA5Q96FF9 TPM4P1-201ENST00000436100 807 ntBASIC23.54■■□□□ 1.36
CDCA5Q96FF9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDCA5Q96FF9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDCA5Q96FF9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDCA5Q96FF9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms