Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ATP6V0A1Q93050 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.46■■□□□ 1.19
ATP6V0A1Q93050 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.46■■□□□ 1.19
ATP6V0A1Q93050 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.46■■□□□ 1.19
ATP6V0A1Q93050 AC233702.5-201ENST00000584107 538 ntBASIC22.46■■□□□ 1.19
ATP6V0A1Q93050 AC110285.5-201ENST00000611501 352 ntBASIC22.46■■□□□ 1.19
ATP6V0A1Q93050 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
ATP6V0A1Q93050 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.46■■□□□ 1.19
ATP6V0A1Q93050 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.46■■□□□ 1.19
ATP6V0A1Q93050 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.46■■□□□ 1.19
ATP6V0A1Q93050 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
ATP6V0A1Q93050 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.45■■□□□ 1.19
ATP6V0A1Q93050 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.45■■□□□ 1.19
ATP6V0A1Q93050 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ATP6V0A1Q93050 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
ATP6V0A1Q93050 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V0A1Q93050 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V0A1Q93050 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V0A1Q93050 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V0A1Q93050 DPP3P2-201ENST00000416030 1696 ntBASIC22.44■■□□□ 1.18
ATP6V0A1Q93050 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.44■■□□□ 1.18
ATP6V0A1Q93050 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V0A1Q93050 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V0A1Q93050 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.44■■□□□ 1.18
ATP6V0A1Q93050 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V0A1Q93050 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V0A1Q93050 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.44■■□□□ 1.18
ATP6V0A1Q93050 AL031963.3-201ENST00000606441 850 ntBASIC22.44■■□□□ 1.18
ATP6V0A1Q93050 AC073912.3-201ENST00000624414 853 ntBASIC22.44■■□□□ 1.18
ATP6V0A1Q93050 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V0A1Q93050 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
ATP6V0A1Q93050 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 KRT8P20-201ENST00000423953 1409 ntBASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.43■■□□□ 1.18
ATP6V0A1Q93050 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP6V0A1Q93050 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.42■■□□□ 1.18
ATP6V0A1Q93050 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP6V0A1Q93050 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP6V0A1Q93050 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.42■■□□□ 1.18
ATP6V0A1Q93050 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
ATP6V0A1Q93050 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.42■■□□□ 1.18
ATP6V0A1Q93050 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ATP6V0A1Q93050 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.42■■□□□ 1.18
ATP6V0A1Q93050 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP6V0A1Q93050 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP6V0A1Q93050 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.42■■□□□ 1.18
ATP6V0A1Q93050 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V0A1Q93050 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V0A1Q93050 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V0A1Q93050 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V0A1Q93050 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.41■■□□□ 1.18
ATP6V0A1Q93050 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V0A1Q93050 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V0A1Q93050 TSPY7P-201ENST00000431358 1114 ntBASIC22.41■■□□□ 1.18
ATP6V0A1Q93050 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
ATP6V0A1Q93050 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V0A1Q93050 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V0A1Q93050 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.41■■□□□ 1.18
ATP6V0A1Q93050 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V0A1Q93050 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP6V0A1Q93050 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms