Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.36■■□□□ 1.01
DDX1Q92499 RPS2P52-201ENST00000469610 820 ntBASIC21.36■■□□□ 1.01
DDX1Q92499 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.36■■□□□ 1.01
DDX1Q92499 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.36■■□□□ 1.01
DDX1Q92499 C2orf69P4-201ENST00000565394 541 ntBASIC21.36■■□□□ 1.01
DDX1Q92499 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX1Q92499 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX1Q92499 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX1Q92499 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.36■■□□□ 1.01
DDX1Q92499 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX1Q92499 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX1Q92499 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX1Q92499 AC125437.2-201ENST00000625180 2167 ntBASIC21.36■■□□□ 1.01
DDX1Q92499 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.36■■□□□ 1.01
DDX1Q92499 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX1Q92499 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DDX1Q92499 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.35■■□□□ 1.01
DDX1Q92499 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX1Q92499 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX1Q92499 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DDX1Q92499 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX1Q92499 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX1Q92499 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.35■■□□□ 1.01
DDX1Q92499 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.35■■□□□ 1.01
DDX1Q92499 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX1Q92499 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.35■■□□□ 1.01
DDX1Q92499 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.35■■□□□ 1.01
DDX1Q92499 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.35■■□□□ 1.01
DDX1Q92499 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.35■■□□□ 1.01
DDX1Q92499 KRT8P17-201ENST00000453110 1448 ntBASIC21.35■■□□□ 1.01
DDX1Q92499 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DDX1Q92499 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX1Q92499 MKRN4P-201ENST00000444706 1521 ntBASIC21.34■■□□□ 1.01
DDX1Q92499 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.34■■□□□ 1.01
DDX1Q92499 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX1Q92499 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX1Q92499 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX1Q92499 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX1Q92499 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX1Q92499 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX1Q92499 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX1Q92499 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
DDX1Q92499 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.34■■□□□ 1.01
DDX1Q92499 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX1Q92499 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX1Q92499 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX1Q92499 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.34■■□□□ 1.01
DDX1Q92499 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX1Q92499 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX1Q92499 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX1Q92499 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX1Q92499 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX1Q92499 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX1Q92499 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
DDX1Q92499 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX1Q92499 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX1Q92499 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX1Q92499 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX1Q92499 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
DDX1Q92499 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX1Q92499 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DDX1Q92499 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.33■■□□□ 1.01
DDX1Q92499 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX1Q92499 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX1Q92499 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX1Q92499 RPS2P4-201ENST00000476944 856 ntBASIC21.33■■□□□ 1.01
DDX1Q92499 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.33■■□□□ 1.01
DDX1Q92499 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.33■■□□□ 1.01
DDX1Q92499 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.33■■□□□ 1.01
DDX1Q92499 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.33■■□□□ 1.01
DDX1Q92499 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.33■■□□□ 1.01
DDX1Q92499 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.33■■□□□ 1.01
DDX1Q92499 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DDX1Q92499 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.33■■□□□ 1
DDX1Q92499 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.33■■□□□ 1
DDX1Q92499 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.33■■□□□ 1
DDX1Q92499 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DDX1Q92499 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX1Q92499 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX1Q92499 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
DDX1Q92499 DUSP5P2-201ENST00000426873 1033 ntBASIC21.32■■□□□ 1
DDX1Q92499 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX1Q92499 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX1Q92499 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
DDX1Q92499 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX1Q92499 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX1Q92499 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
DDX1Q92499 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.31■■□□□ 1
DDX1Q92499 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX1Q92499 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX1Q92499 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.31■■□□□ 1
DDX1Q92499 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX1Q92499 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX1Q92499 GCSHP5-201ENST00000443090 522 ntBASIC21.31■■□□□ 1
DDX1Q92499 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.31■■□□□ 1
DDX1Q92499 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX1Q92499 AL031963.3-201ENST00000606441 850 ntBASIC21.31■■□□□ 1
DDX1Q92499 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
DDX1Q92499 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
DDX1Q92499 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms